Job Description P76469 Confidence 47.53% Date Thu Jan 5 12:23:13 GMT 2012 Rank 324 Aligned Residues 192 % Identity 14% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.													30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.	.
Query Sequence		K	G	E	V	Q	I	G	L	W	L	S	S	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	.	.	.	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	.	.	.	.	A	S	Q	P	V	I	R	P
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.	.
Template Conservation
Template Sequence		D	K	N	I	I	I	G	A	X	T	A	L	I	T	P	F	K	N	G	K	V	D	E	Q	S	Y	A	R	L	I	K	R	Q	I	E	N	G	I	D	A	V	V	P	V	G	T	T	G	E	S	A	T	L	T	H	E	E	H	R	T	C	I	E	I	A	V	E	T	C	K	G	T	K	V	K	V	L	A	G	A
Template Known Secondary structure																			T	T																T	T	T						T	T	S	T	T	T	T	G	G	G	S																	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		76	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																			.	.	.	.													.
Query SS confidence									.	.	.	.																			.	.	.	.													.
Query Sequence		V	E	G	S	K	P	L	.	.	.	.	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	.	.	.	.	T	A	E	Q	A	R	Q	V	V	S	A	T	.	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L
Query Conservation									.	.	.	.																			.	.	.	.													.
Alig confidence									.	.	.	.																			.	.	.	.													.								.	.
Template Conservation																																																							.	.
Template Sequence		G	S	N	A	T	H	E	A	V	G	L	A	K	F	A	K	E	H	G	A	D	G	I	L	S	V	A	P	Y	Y	N	K	P	T	Q	Q	G	L	Y	E	H	Y	K	A	I	A	Q	S	V	D	I	P	V	.	.	L	L	Y	N	V	P	G	R	T	G	C	E	I	S	T	D	T	I	I	K	L	F	R	D	C
Template Known Secondary structure				S	S														T	T		S									S	S																			S	S			.	.										S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.															.	.
Query SS confidence																																				.	.	.															.	.
Query Sequence		C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	.	.	.	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	.	.	V	Q	R	I	I	E	T	S	I	R	R	I	R	A
Query Conservation																																				.	.	.															.	.
Alig confidence																																				.	.	.															.	.
Template Conservation
Template Sequence		E	N	I	Y	G	V	E	A	S	G	N	I	D	K	C	V	D	L	L	A	H	E	P	R	X	X	L	I	S	G	E	D	A	I	N	Y	P	I	L	S	N	G	G	K	G	V	I	S	V	T	S	N	L	L	P	D	X	I	S	A	L	T	H	F	A	L	D
Template Known Secondary structure		T	T							S	S													T	T	S	B						G	G	G							T	T							S	G	G	G	T														T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions