Job Description P76469 Confidence 50.20% Date Thu Jan 5 12:23:13 GMT 2012 Rank 314 Aligned Residues 114 % Identity 16% Template c3lciA_ PDB info PDB header:lyase Chain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w Resolution 2.12 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		K	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	.	.	.	.	.	.	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G
Template Known Secondary structure											T	T		S					S	S	G	G	G	T	G	G	G	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																											.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
					154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.									.	.	.	220	.
Predicted Secondary structure		.	.	.																																																									.								.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																									.								.	.	.	.	.	.	.	.
Query Sequence		.	.	.	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	.	G	K	A	A	G	F	L	.	.	.	.	.	.	.	.	A	V	A	P	D
Query Conservation		.	.	.																																																									.								.	.	.	.	.	.	.	.
Alig confidence		.	.	.															.										.	.	.	.	.	.	.	.	.	.																							.								.	.	.	.	.	.	.	.
Template Conservation																			.										.	.	.	.	.	.	.	.	.	.
Template Sequence		C	V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	R	Y	.	G	F	D	A	V	S	A	V	T	.	.	.	.	.	.	.	.	.	.	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D
Template Known Secondary structure			S	S															.	T		S							.	.	.	.	.	.	.	.	.	.			S	S																		T	T	T
Template Predicted Secondary structure																			.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		222	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Q	Q	C	L	A	W	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	N	T	L	V	T	L	P
Template Known Secondary structure								T	S	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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