Job Description P76469 Confidence 99.49% Date Thu Jan 5 12:23:13 GMT 2012 Rank 31 Aligned Residues 200 % Identity 19% Template c3khdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of pff1300w. Resolution 2.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.															.	.	.	.
Query SS confidence																																																					.															.	.	.	.
Query Sequence		L	L	S	N	P	F	K	E	R	L	R	K	G	E	V	Q	I	G	L	W	L	S	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	I	.	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	.	.	.	.	S	Q	P	V	I	R	P	V	E	G
Query Conservation																																																					.															.	.	.	.
Alig confidence																																																					.															.	.	.	.
Template Conservation
Template Sequence		L	E	P	N	N	V	N	L	R	S	K	K	T	H	I	V	C	T	L	G	P	A	C	K	S	V	E	T	L	V	K	L	I	D	A	G	M	D	I	C	R	F	N	F	S	H	G	S	H	E	D	H	K	E	M	F	N	N	V	L	K	A	Q	E	L	R	P	N	C	L	L	G	M	L	L	D	T	K	E	K
Template Known Secondary structure			S						G	G	G		S	S								T	T	S		S										T									T	T	S	S																				S	S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		79	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		S	K	P	L	I	.	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A
Query Conservation							.
Alig confidence							.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	N	D	I	L	N	F	A	I	P	M	G	C	N	F	I	A	A	S	F	I	Q	S	A	D	D	V	R	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	L	L	G	P	R	G	R	H	I	K	I	I	P	K	I	E	N	I	E	G
Template Known Secondary structure		S	S					T	T					T		S						S			S	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T	S	S	S								S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																												.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220								.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.					.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.					.	.	.	.	.	.	.
Query Sequence		L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	.	.	.	.	.	.	.	A	V	A	P	.	.	.	.	.	.	.	D	M	A
Query Conservation																																																													.	.	.	.	.	.	.					.	.	.	.	.	.	.
Alig confidence												.	.															.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.					.	.	.	.	.	.	.
Template Conservation												.	.															.	.	.	.	.	.	.	.	.
Template Sequence		I	I	H	F	D	K	I	L	A	E	.	.	S	D	G	I	M	I	A	R	G	D	L	G	S	P	.	.	.	.	.	.	.	.	.	E	K	V	F	L	A	Q	K	L	M	I	S	K	C	N	L	Q	G	K	P	I	I	T	A	T	Q	M	L	E	S	M	T	K	N	P	R	P	T	R	A	E	V	T	D	V
Template Known Secondary structure				T								.	.	S	S													.	.	.	.	.	.	.	.	.	T	T																T							S				G	G	G	G	T		S	S
Template Predicted Secondary structure												.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.										.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V	D	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	A	V	L	D	G	T	D	C	V	M	L	S	G	E	T	A
Template Known Secondary structure								T		S					S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions