Job Description P76469 Confidence 40.87% Date Thu Jan 5 12:23:13 GMT 2012 Rank 348 Aligned Residues 178 % Identity 11% Template c3fkkA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase Resolution 2.10 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.
Predicted Secondary structure																			.	.	.																				.	.	.																.	.	.	.																	.	.
Query SS confidence																			.	.	.																				.	.	.																.	.	.	.																	.	.
Query Sequence		Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	.	.	.	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	.	.	.	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	.	.	.	.	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	.	.	P
Query Conservation																			.	.	.																				.	.	.																.	.	.	.																	.	.
Alig confidence																			.	.	.																				.	.	.																.	.	.	.																	.	.
Template Conservation
Template Sequence		R	A	V	D	F	M	I	D	A	G	S	D	G	L	C	I	L	A	N	F	S	E	Q	F	A	I	T	D	D	E	R	D	V	L	T	R	T	I	L	E	H	V	A	G	R	V	P	V	I	V	T	T	S	H	Y	S	T	Q	V	C	A	A	R	S	L	R	A	Q	Q	L	G	A	A	M	V	M	A	M	P	P
Template Known Secondary structure										T	T		S					S	S	G	G	G	T	G	G	G	S																	T	T	S	S									S															T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		98	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170
Predicted Secondary structure				.	.	.	.	.																																																					.															.
Query SS confidence				.	.	.	.	.																																																					.															.
Query Sequence		M	V	.	.	.	.	.	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	.	V	E	S	K	T	A	L	D	N	L	D	E	I	L	.	D	V	E	G	I
Query Conservation				.	.	.	.	.																																																					.															.
Alig confidence				.	.	.	.	.															.																																						.															.
Template Conservation																							.
Template Sequence		Y	H	G	A	T	F	R	V	P	E	A	Q	I	F	E	F	Y	A	R	V	S	.	D	A	I	A	I	P	I	M	V	Q	D	A	P	A	S	G	T	A	L	S	A	P	F	L	A	R	M	A	R	E	I	E	Q	V	A	Y	F	K	I	E	T	P	G	A	A	N	K	L	R	E	L	I	R	L	G	G	D	A
Template Known Secondary structure			B	T	T	T	B																.				S	S								G	G	G																S	T	T								S	T	T													G	G	G
Template Predicted Secondary structure																							.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		171	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		D	G	V	F	I	G	P	A	D	L	.	.	.	.	.	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		I	E	G	P	W	D	G	E	E	A	I	T	L	L	A	D	L	H	A	G	A	T	G	A	M	T	G	G	G	F	P	D	G	I	R	P	I	L	E	A	W	R	E
Template Known Secondary structure									G	G	G	T	T							T	T								S	S														T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions