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Job DescriptionP76469
Confidence85.18%DateThu Jan 5 12:23:13 GMT 2012
Rank171Aligned Residues112
% Identity16%Templatec3f6cB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  FKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLD
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Template Sequence  IRNLLIKNDIEI. LAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLR. . KRQYSGIIIIVSAKDHFYGKHCAD
Template Known Secondary structure  TT.SSSTT

STT
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   16...20....... ..30.........40.........50.........60........ .70.........80.........90..
 
   8990.........100.........110.........120.......
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Query Sequence  IGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVA
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Template Sequence  AGANGFVSKKEGMNNIIAAIEAAKN. . . . GYCYFPFSLN
Template Known Secondary structure  TT
SGGG
TT....T

B





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   94.....100.........110........ .120........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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