Return to main results Retrieve Phyre Job Id

Job DescriptionP76469
Confidence24.53%DateThu Jan 5 12:23:13 GMT 2012
Rank435Aligned Residues105
% Identity12%Templatec3exsB_
PDB info PDB header:lyaseChain: B: PDB Molecule:rmpd (hexulose-6-phosphate synthase); PDBTitle: crystal structure of kgpdc from streptococcus mutans in2 complex with d-r5p
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.. .......40.........50.........60.........70.... .....80.....
Predicted Secondary structure 






.














.




Query SS confidence 
























.









































.










Query Sequence  PFKERLRKGEVQIGLWLSSTTAYMA. EIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIR. PVEGSKPLIKQ
Query Conservation   
   
  
    
       
   .
  
  
 
 
 

 

           
 
    
    

.
       
  
Alig confidence 
























.









































.










Template Conservation    
        
  
 
  

           


 



                                        
Template Sequence  EVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQ
Template Known Secondary structure 
SSS
S
TTT
STTS

TTT


SS

Template Predicted Secondary structure 

























Template SS confidence 















































































   50.........60.........70.........80.........90.........100.........110.........120.........
 
   86...90........ .100.........110..
Predicted Secondary structure 





..


Query SS confidence 












. .













Query Sequence  VLDIGAQTLLIPM. . VDTAEQARQVVSAT
Query Conservation   

 

 

  
 ..
   
 
   
 
 
Alig confidence 












..













Template Conservation      
                
       
Template Sequence  WLDAGISQAIYHQSRTWGEKDLNKVKKLI
Template Known Secondary structure  TT







Template Predicted Secondary structure 











Template SS confidence 




























   130.........140.........150........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions