Job Description P76469 Confidence 99.78% Date Thu Jan 5 12:23:13 GMT 2012 Rank 30 Aligned Residues 202 % Identity 17% Template c3cuxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:malate synthase; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design Resolution 1.70 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.																	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																													.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																													.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	.	.	.	.	.	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	.	.	.	.
Query Conservation																													.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence																													.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		V	D	R	K	M	V	I	N	A	L	N	S	G	A	H	L	F	M	A	D	F	E	D	S	N	S	P	T	W	E	N	A	I	E	G	Q	I	N	L	R	D	A	V	K	G	T	I	S	H	K	N	E	N	G	K	E	Y	R	L	N	S	K	T	A	V	L	I	V	R	P	R	G	W	H	L	E	E	K	H	M
Template Known Secondary structure		S										T	S	S		S						S	S	T	T	S																				T							T	T	S							S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
																							82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	D	G	K	N	M	S	G	S	L	V	D	F	G	L	Y	F	F	H	N	A	K	A	L	L	E	K	G	S	G	P	Y	F	Y	L	P	K	M	E	S	Y	L	E	A	R	L	W	N	D	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	A	Q	K	Y	I	G
Template Known Secondary structure				T	T																								T	T												S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																					.	.	.	230	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.															.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																											.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	.	.	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	V	Q	R	I	I	E	T	S	I	R
Query Conservation																											.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	N	G	T	I	K	A	T	V	L	L	E	T	I	H	A	S	F	E	M	D	E	I	L	Y	E	L	K	D	H	S	A	G	L	N	C	G	R	W	D	Y	I	F	S	F	L	K	A	F	R	N	H	N	E	F	L	L	P	D	R	A	Q	V	T	M	T	A	P	F	M	R	A	Y	S	L	K	V	I	Q
Template Known Secondary structure				T	T										S					T	S								T	G	G	G								S											T	T	T		T	T						G	G	G			T	T	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		R	I	R	A	A	G	K	A	A	G	F	L	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A	N	.	.	F	V	A	V	G	V	D	T	M	L	Y	S	D	A	L	D	Q
Query Conservation																														.	.
Alig confidence											.																			.	.
Template Conservation											.
Template Sequence		T	C	H	R	R	N	A	P	A	.	I	G	E	K	V	R	A	D	K	E	R	E	A	L	D	G	H	D	G	T	W	V	A	H	P	G	L	V	P	V	A	M	E	V	F	N	H
Template Known Secondary structure						T	T				.																T		S	B				S	S	G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		315	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions