Job Description P76469 Confidence 94.72% Date Thu Jan 5 12:23:13 GMT 2012 Rank 102 Aligned Residues 220 % Identity 10% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.
Predicted Secondary structure																								.	.																						.	.																																.
Query SS confidence																								.	.																						.	.																																.
Query Sequence		P	F	K	E	R	L	R	K	G	E	V	Q	I	G	L	W	L	S	S	T	T	A	.	.	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	.	.	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	.	L
Query Conservation																								.	.																						.	.																																.
Alig confidence																								.	.																						.	.																.																.
Template Conservation																																																																.
Template Sequence		S	L	I	Q	Q	L	K	Q	Q	K	L	S	V	G	I	L	S	A	N	W	L	Q	L	N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	T	H	C	F	K	D	V	H	L	X	V	R	N	Q	L	E	V
Template Known Secondary structure								T	T							G	G	G	S		G	G	G											T	T										B	S	S	S	S	S		B		B		T					T	S		.	T	T	S									S
Template Predicted Secondary structure																																																																.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D
Query Conservation
Alig confidence												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		A	K	A	V	V	A	N	G	A	N	.	L	V	T	L	Q	L	E	Q	Y	H	D	F	A	L	T	I	E	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	.	.	I	S	E	L	E
Template Known Secondary structure								T	T		S	.						T	T		T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						T	T													T	T	S		.	.	G	G	G	G	T
Template Predicted Secondary structure												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.																.	.
Query SS confidence																																																								.	.	.																.	.
Query Sequence		E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	.	.	.	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A	.	.	N	F	V	A	V	G
Query Conservation																																																								.	.	.																.	.
Alig confidence				.	.										.	.	.	.																																						.	.	.																.	.
Template Conservation				.	.										.	.	.	.
Template Sequence		P	Y	.	.	L	D	Q	I	D	V	I	Q	L	.	.	.	.	L	T	L	D	P	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G
Template Known Secondary structure		T	T	.	.	T	T	T		S					.	.	.	.		S			T	T	T	T																				G	G	G	G	G	G							S	S												S	S	S
Template Predicted Secondary structure				.	.										.	.	.	.
Template SS confidence
		143	.			.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	M	L	Y	S	D	A	L	D	Q	R	L	A	M	F	K	S	G
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		S	A	L	F	.	.	S	G	E	L	K	T	N	L	K	V	W	K	S	S
Template Known Secondary structure		G	G	G	G	.	.	S	S
Template Predicted Secondary structure						.	.
Template SS confidence
		217	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions