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Job DescriptionP76469
Confidence41.64%DateThu Jan 5 12:23:13 GMT 2012
Rank343Aligned Residues155
% Identity19%Templatec3c52B_
PDB info PDB header:lyaseChain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.... .....60.........70.........80.........90.....
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Query Sequence  VQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTI. . QDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLL
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Template Sequence  PVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMG. . . . . . . . . . . . . . .
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   76...80.........90.........100.........110.........120.........130.........140
 
   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  IPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFI
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Template Sequence  . . ILVNPKEAEQFVKES. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QVDYLAP
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   141........150..... ....160..
 
   176...180.........190..... ....200.........210......... 220.........230
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Query Sequence  GPADLSASLGYPDNAGHPEV. QRIIETSIRRIRAAGKAAGFLAVA. . . . . . . . . . . . . . . . . . . . . . . . PDMAQQCLAWG
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Template Sequence  AIG. . . TSHGAFKFKGEPKLDFERLQEVKRLT. . . NIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGG
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   175.. ..180.........190.........200... ......210.........220.........230.........240........
 
   231........240.........250....
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Query Sequence  ANFVAVGVDTMLYSDALDQRLAMF
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Template Sequence  INKVNTDTD. . . LRIAFIAEVRKV
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   249250....... ..260.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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