Job Description P76469 Confidence 20.84% Date Thu Jan 5 12:23:13 GMT 2012 Rank 469 Aligned Residues 187 % Identity 12% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

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		21	.	.	.	.	.	.	.	.													30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.														.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.														.	.
Query Sequence		G	L	W	L	S	S	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	.	.	.	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	.	.	.	A	S	Q	P	V	I	R	P	V	E	G	S	K	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.														.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.														.	.
Template Conservation
Template Sequence		G	S	G	V	A	I	I	T	P	F	T	N	T	G	V	D	F	D	K	L	S	E	L	I	E	W	H	I	K	S	K	T	D	A	I	I	V	C	G	T	T	G	E	A	T	T	M	T	E	T	E	R	K	E	T	I	K	F	V	I	D	K	V	N	K	R	I	P	V	I	A	G	T	G	S	N	N	T	A	A
Template Known Secondary structure											B		S	S	S	B															T	T							S	S	G	G	G	T	G	G	G	S																	T	T	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.																					.	.	.	.
Query SS confidence		.	.																					.	.	.	.
Query Sequence		.	.	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	.	.	.	.	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S
Query Conservation		.	.																					.	.	.	.
Alig confidence		.	.																					.	.	.	.																	.
Template Conservation																																												.
Template Sequence		S	I	A	M	S	K	W	A	E	S	I	G	V	D	G	L	L	V	I	T	P	Y	Y	N	K	T	T	Q	K	G	L	V	K	H	F	K	A	V	S	D	A	V	.	S	T	P	I	I	I	Y	N	V	P	G	R	T	G	L	N	I	T	P	G	T	L	K	E	L	C	E	D	K	N	I	V	A	V	K	E	A
Template Known Secondary structure												T	T		S									S	S																	T		.		S												S												T	T	S	S	S
Template Predicted Secondary structure																																												.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.															.	.
Query SS confidence																												.	.	.	.															.	.
Query Sequence		K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	.	.	.	.	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	.	.	V	Q	R	I	I	E	T	S	I	R	R	I	R	A
Query Conservation																												.	.	.	.															.	.
Alig confidence																												.	.	.	.															.	.
Template Conservation
Template Sequence		S	G	N	I	S	Q	I	A	Q	I	K	A	L	C	G	D	K	L	D	I	Y	S	G	N	D	D	Q	I	I	P	I	L	A	L	G	G	I	G	V	I	S	V	L	A	N	V	I	P	E	D	V	H	N	M	C	E	L	Y	L	N
Template Known Secondary structure		S														G	G	G						S		G	G	G							T	T							S	G	G	G	T														T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions