Job Description P76469 Confidence 37.33% Date Thu Jan 5 12:23:13 GMT 2012 Rank 362 Aligned Residues 130 % Identity 22% Template c2y0fD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 Resolution 2.50 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N
Query Conservation
Alig confidence														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	V	L	E	L	H	R	A	G	S	E	.	I	V	R	L	T	V	N	D	E	E	A	A	K	A	V	P	E	I	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	L	A	E	G	V	E	V	P	L	V	G	D	F	H	F	N	G	H	L	L	L	R	K
Template Known Secondary structure										T	T		S	.								S					T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T										S	S
Template Predicted Secondary structure														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220
Predicted Secondary structure																																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	.	.	G	F	L	A	V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	K	M	A	E	.	.	A	L	D	K	F	R	I	N	P	E	H	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	I	R	I	A	M	D	L	G	K	P	V	R	I	G	A	N	W	G	S	L	D	P	A	L	L	T	E	L	M	D	R	N	A	S	R	P	E	P
Template Known Secondary structure								.	.			S								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T									G	G	G	S															S	S	S
Template Predicted Secondary structure								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.																				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
																		221	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	A	Q	Q	C	L	A	W	G	A	N	F	.	.	.	.	V	A	V	.	G	V	D	T	M	L	Y	S	D	A	L	D	Q	R	L	A	M	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.				.
Template Conservation
Template Sequence		K	S	A	H	E	V	V	L	E	A	L	V	E	S	A	V	R	A	Y	E	A	A	L	E	M	G	L	G	E	D	K	L	V	L	S	A	K	V	S	K	A	R	D	L	V	W	V	Y	R	E	L	A	R	R	T
Template Known Secondary structure																														G	G	G							B	S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions