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Job DescriptionP76469
Confidence99.85%DateThu Jan 5 12:23:13 GMT 2012
Rank26Aligned Residues206
% Identity26%Templatec2olsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphoenolpyruvate synthase; PDBTitle: the crystal structure of the phosphoenolpyruvate synthase from2 neisseria meningitidis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40... ......50.... .....60..
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Query Sequence  GLWLSSTTAYMAEIAATSGYDWL. LIDGEHAPNTI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QDLYHQLQ
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Template Sequence  KVMMNVGNPELAFSFANLPSEGIGLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVA
Template Known Secondary structure 

GGGSS

S
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B
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   486...490.........500.........510.........520.........530.........540.........550.........560.....
 
   63... ...70.........80... ......90... ..
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Query Sequence  AVAP. . YASQPVIRPVEGSKPLI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KQVLDIGAQT. . . LL
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Template Sequence  TLAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVADNFKDCFALECKALKRVRDEMGLTNVEIM
Template Known Secondary structure  TTS




TSBT
GGGS


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GGGSS
T
TTTTS

TT
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   566...570.........580.........590.........600.........610.........620.........630.........640.....
 
   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  IPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFI
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Template Sequence  IPFVRTLGEAEAVVKALK. . . . . . . . . . . . . . . . . . . . . . ENGLERGKNGLRLIMMCELPSNAVLAEQFLQ. . YFDGFSI
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TTGGG


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   646...650.........660... ......670.........680.........690.... .....700.
 
   176...180.... .....190.........200.........210...... ... 220.........230.........240.
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Query Sequence  GPADLSASL. . . . . . . . . . GYPDNAGHPEVQRIIETSIRRIRAAGKAAGFL. . . AVA. PDMAQQCLAWGANFVAVGVDTM
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Template Sequence  GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTV
Template Known Secondary structure  T

TT
TTTGGG

TTSTTT
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   702.......710.........720.........730.........740.........750.........760.........770.........780.
 
   242.......250...
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Query Sequence  LYSDALDQRLAM
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Template Sequence  I. . . ETWLYLAN
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   782 .......790
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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