Job Description P76469 Confidence 73.26% Date Thu Jan 5 12:23:13 GMT 2012 Rank 222 Aligned Residues 121 % Identity 21% Template c2jgqB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori Resolution 2.3 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.														.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																.								.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.								.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	A	A	T	S	G	Y	D	W	L	L	I	.	D	G	E	H	A	P	N	.	.	.	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	L	D	I	G	A	Q	T	L
Query Conservation																.								.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.								.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	H	L	E	E	L	K	I	H	T	L	L	I	G	H	S	E	R	R	T	L	L	K	E	S	P	S	F	L	K	E	K	F	D	F	F	K	S	K	N	F	K	I	V	Y	C	I	G	E	E	L	T	T	R	E	K	G	F	K	A	V	K	E	F	L	S	E	Q	L	E	N	I	D	L	N	Y	P	N	L
Template Known Secondary structure								T	T														T	S																	T	T																														T	T	S		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		95	.	.									.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		L	I	P	.	.	.	.	.	.	.	.	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	A	Y	E	P	I	W	A	I	G	T	S	A	S	L	E	D	I	Y	L	T	H	G	F	L	.	.	.	.	.	.	.	K	Q	I	L	N	Q	K	T	P	L	L	Y	G	G	S	V	N	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	K	E	I	L	G
Template Known Secondary structure								G	G	G	T	T																.	.	.	.	.	.	.	T	T	T	S		T	T	S						S	S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						T
Template Predicted Secondary structure																												.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																						200	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	G	I	D	G	V	F	I	G	P	A	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	S	V	D	G	L	L	I	G	S	A	S	W
Template Known Secondary structure		S	T	T								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions