Job Description P76469 Confidence 55.58% Date Thu Jan 5 12:23:13 GMT 2012 Rank 288 Aligned Residues 182 % Identity 11% Template c2hmcA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: the crystal structure of dihydrodipicolinate synthase dapa from2 agrobacterium tumefaciens Resolution 1.90 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.
Predicted Secondary structure																		.	.	.																																				.	.	.	.																	.	.	.	.	.
Query SS confidence																		.	.	.																																				.	.	.	.																	.	.	.	.	.
Query Sequence		Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	.	.	.	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	.	.	.	.	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	.	.	.	.	.	P
Query Conservation																		.	.	.																																				.	.	.	.																	.	.	.	.	.
Alig confidence																		.	.	.																																				.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		R	K	G	K	E	L	I	A	D	G	X	S	A	V	V	Y	C	G	S	X	G	D	W	P	L	L	T	D	E	Q	R	X	E	G	V	E	R	L	V	K	A	G	I	P	V	I	V	G	T	G	A	V	N	T	A	S	A	V	A	H	A	V	H	A	Q	K	V	G	A	K	G	L	X	V	I	P	R	V	L	S
Template Known Secondary structure										T	T							S	S	G	G	G	T	G	G	G	S															T	T										S	S															T		S									S	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	.	.	.	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F
Query Conservation																																																											.	.	.
Alig confidence																																																											.	.	.
Template Conservation
Template Sequence		R	G	S	V	I	A	A	Q	K	A	H	F	K	A	I	L	S	A	A	P	E	I	P	A	V	I	Y	N	S	P	Y	Y	G	F	A	T	R	A	D	L	F	F	A	L	R	A	E	H	K	N	L	V	G	F	K	E	F	G	G	P	A	D	X	R	Y	A	A	E	N	I	T	S	R	D	D	E	V	T	L	X
Template Known Secondary structure		S	T	T																S	T	T	S							B	G	G	G	T	B															T	T								S												T	S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		175	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure								.	.	.	.															.	.
Query SS confidence								.	.	.	.															.	.
Query Sequence		I	G	P	A	D	L	.	.	.	.	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	.	.	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K
Query Conservation								.	.	.	.															.	.
Alig confidence								.	.	.	.															.	.
Template Conservation
Template Sequence		I	G	V	D	T	A	V	V	H	G	F	V	N	C	G	A	T	G	A	I	T	G	I	G	N	V	L	P	K	E	V	I	H	L	C	K	L	S	Q	A	A	A	K
Template Known Secondary structure				S	G	G	G								S								S	G	G	G	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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