Job Description P76469 Confidence 37.66% Date Thu Jan 5 12:23:13 GMT 2012 Rank 359 Aligned Residues 164 % Identity 11% Template c2dy3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum Resolution 2.10 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		N	H	G	V	E	K	V	A	P	V	I	A	A	H	G	A	D	A	F	G	V	.	.	.	.	.	.	.	.	.	A	T	L	A	E	A	M	Q	L	R	D	I	G	I	S	Q	E	V	L	C	W	I	W	T	P	E	Q	D	F	R	A	A	I	D	R	N	.	.	.	.	I	D	L	A	V	I	S	P	A	H
Template Known Secondary structure		T	T											T	T	T							.	.	.	.	.	.	.	.	.												T	T			S									T	T	S							T	T	T	.	.	.	.							S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.
Query Sequence		A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	.	.	.	.	.	.	.	.	.	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I
Query Conservation																																																					.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	L	I	E	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	H	I	R	V	S	I	K	I	D	S	G	L	H	R	S	G	V	D	E	Q	E	W	E	G	V	F	S	A	L	A	A	A	P	H	I	E	V	T	G	M
Template Known Secondary structure							T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								B			S	S		S	S	S	B																T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.																															.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	.	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V
Query Conservation																																											.
Alig confidence					.	.	.	.	.	.	.																																.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		F	T	H	.	.	.	.	.	.	.	L	A	C	A	P	E	T	D	R	Q	I	I	A	F	R	R	A	L	A	L	A	R	K	H	G	L	E	C	P	V	N	H	V	C	N	S	P	A	F	L	T	R	S	D	L	H	M	E	M	V	R	P	G	L
Template Known Secondary structure					.	.	.	.	.	.	.																								T	T							B								T	T		G	G	G		T	T						G
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		156	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions