Return to main results Retrieve Phyre Job Id

Job DescriptionP76469
Confidence81.98%DateThu Jan 5 12:23:13 GMT 2012
Rank186Aligned Residues109
% Identity15%Templatec1ys7B_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  NALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKP
Query Conservation       
 
   
  
    
       
   
  
  
 
 
 

 

           
 
    
    


      
Alig confidence 















..










































.

















Template Conservation         
   
   
..  
         
        
 



       
      

.       

 

      
Template Sequence  DSDVLASLERGLRLSG. . FEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALR. AMDNDVPVCVLSARSSVD
Template Known Secondary structure 
TT..
SSS

SSS
SSS
.TT



TT
Template Predicted Secondary structure 


..
















.









Template SS confidence 















































































   16...20.........30. ........40.........50.........60.........70.... .....80.........90..
 
   82.......90.........100.........110...
Predicted Secondary structure 









Query SS confidence 































Query Sequence  LIKQVLDIGAQTLLIPMVDTAEQARQVVSATR
Query Conservation   
   

 

 

  
 
   
 
   
 
 
Alig confidence 































Template Conservation          

   
 

     
   
     
Template Sequence  DRVAGLEAGADDYLVKPFVLAELVARVKALLR
Template Known Secondary structure  T

S

Template Predicted Secondary structure 












Template SS confidence 































   93......100.........110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions