Job Description P76469 Confidence 20.88% Date Thu Jan 5 12:23:13 GMT 2012 Rank 468 Aligned Residues 169 % Identity 14% Template c1xfcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: the 1.9 a crystal structure of alanine racemase from mycobacterium2 tuberculosis contains a conserved entryway into the active site Resolution 1.90 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Sequence		G	H	G	A	T	R	V	A	Q	T	A	L	G	A	G	A	A	E	L	G	V	.	.	.	.	.	.	.	.	.	A	T	V	D	E	A	L	A	L	R	A	D	G	I	T	A	P	V	L	A	W	L	H	P	P	G	I	D	F	G	P	A	L	L	A	D	V	.	.	.	.	Q	V	A	V	S	S	L	R	Q
Template Known Secondary structure		T	T												T	T							.	.	.	.	.	.	.	.	.	S											T	T			S									T	T									T	T		.	.	.	.						S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.													.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	A	V	R	R	T	G	R	T	A	T	V	T	V	K	V	D	T	G	L	N	R	N	G	V	G	P	A	Q	F	P	A	M	L	T	A	L	R	Q	A	M	A	E	D	A	V	R	L
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T									B		S	S			S	S	S	B		T	T	T														T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.																												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																			.
Query SS confidence																									.	.	.																			.
Query Sequence		V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	.	.	.	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	.	G	F	L	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V
Query Conservation																									.	.	.																			.
Alig confidence								.	.	.	.	.													.	.	.																			.
Template Conservation								.	.	.	.	.
Template Sequence		R	G	L	M	S	H	.	.	.	.	.	M	V	Y	A	D	K	P	D	D	S	I	N	D	V	Q	A	Q	R	F	T	A	F	L	A	Q	A	R	E	Q	G	V	R	F	E	V	A	H	L	S	N	S	S	A	T	M	A	R	P	D	L	T	F	D	L	V	R	P	G	I
Template Known Secondary structure								.	.	.	.	.		S		S	S		T	T	S																				T	T				S														G	G	G			S						G
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions