Job Description P76469 Confidence 60.66% Date Thu Jan 5 12:23:13 GMT 2012 Rank 267 Aligned Residues 183 % Identity 13% Template c1tufA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from m.2 jannaschi Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		N	P	F	K	E	R	L	R	K	G	E	V	.	.	.	.	.	.	Q	I	G	L	W	L	S	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																											.	.	.	.	.	.	.													.
Template Conservation																																														.	.	.	.	.	.	.													.
Template Sequence		N	R	Y	I	E	A	F	K	R	W	E	E	E	T	G	K	E	F	I	V	A	Y	A	Y	A	N	A	N	L	A	I	T	R	L	L	A	K	L	G	C	G	A	D	V	.	.	.	.	.	.	.	V	S	G	G	E	L	Y	I	A	K	L	S	.	N	V	P	S	K	K	I	V	F	N	G	N	C	K	T	K
Template Known Secondary structure									T	T					S																								T	T						.	.	.	.	.	.	.		S										T	.	T			G	G	G						S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.													.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N
Query Conservation
Alig confidence																	.	.	.																.	.
Template Conservation																	.	.	.																.	.
Template Sequence		E	E	I	I	M	G	I	E	A	N	I	R	A	F	N	.	.	.	V	D	S	I	S	E	L	I	L	I	N	E	T	A	K	.	.	E	L	G	E	T	A	N	V	A	F	R	I	N	P	N	V	N	P	K	T	H	P	K	I	S	T	G	L	K	K	N	K	F	G	L	D	V	E	S	G	I	A	M	K	A
Template Known Secondary structure										T	T		S				.	.	.																.	.			T								B							T	T	T	S										S	S		S			T	T	T	T
Template Predicted Secondary structure																	.	.	.																.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A
Query Conservation
Alig confidence																										.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		I	K	M	A	L	E	M	E	Y	V	N	V	V	G	V	H	C	H	I	G	S	Q	L	T	.	.	.	.	.	.	D	I	S	P	F	I	E	E	T	R	K	V	M	D	F	V	V	E
Template Known Secondary structure							T		S	S												S	S	B		.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions