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Job DescriptionP76469
Confidence100.00%DateThu Jan 5 12:23:13 GMT 2012
Rank4Aligned Residues259
% Identity21%Templatec1izcA_
PDB info PDB header:lyaseChain: A: PDB Molecule:macrophomate synthase intermolecular diels-alderase; PDBTitle: crystal structure analysis of macrophomate synthase
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10...... ...20.........30.........40.........50.........60.........70 ......
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Query Sequence  MNALLSNPFKERLRKG. EVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQ. . . PVIRPV
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Template Sequence  YPGNLRQALKDAMADPSKTLMGVAHGIPSTFVTKVLAATKPDFVWIDVEHGMFNRLELHDAIHAAQHHSEGRSLVIVRVP
Template Known Secondary structure  S



GGG

S

T

STTTS


TTT
S

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   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   77..80.........90.........100.........110.........120.........130..... ....140.........150.
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Query Sequence  EGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRI. . . . . ENYMAQVNDSLCLLVQ
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Template Sequence  KHDEVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQ
Template Known Secondary structure  TT
T
STT


S
TTT





STT
BTTTB


SSTT
TT

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   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   152.......160.........170.........180....... ..190.........200.........210.........220......
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Query Sequence  VESKTALDNLDEILDVEGIDGVFIGPADLSASLGYP. . . . . DNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQC
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Template Sequence  IESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGALSVDMVPSL
Template Known Secondary structure 
STT
TT



TT

TT

TTS


TT


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   184.....190.........200.........210.........220.........230.........240.........250.........260...
 
   227..230.........240.........250.........
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Query Sequence  LAWGANFVAVGVDTMLYSDALDQRLAMFKSGKN
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Template Sequence  IEQGYRAIAVQFDVWGLSRLVHGSLAQARASAK
Template Known Secondary structure  TTG
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   264.....270.........280.........290......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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