Job Description P0A8W2 Confidence 98.76% Date Thu Jan 5 11:08:50 GMT 2012 Rank 68 Aligned Residues 82 % Identity 15% Template d2d1ha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 2.05

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	L	T	Q	T	H	W	V	T	L	H	N	I	H	Q	L	P	P	D	Q	S	Q	I	Q	L	A	K	A	I	G	I	E	Q	P	S	L	V	R	T	L	D	Q	L	E	E	K	G	L	I	S	R	Q	T	C	A	S	D	R	R	A	K	R	I	K	L	T	E	K	A	E	P	L	I	S	E	M	E	A	V
Query Conservation
Alig confidence																																																										.	.	.
Template Conservation																																																										.	.	.
Template Sequence		Y	K	I	T	D	T	D	V	A	V	L	L	K	X	V	E	I	E	K	P	I	T	S	E	E	L	A	D	I	F	K	L	S	K	T	T	V	E	N	S	L	K	K	L	I	E	L	G	L	V	V	R	T	K	T	P	.	.	.	K	Y	Y	Y	S	I	S	S	N	I	L	E	K	I	R	N	D	L	L	N	C
Template Known Secondary structure			T																	S												T																T	T	S								.	.	.								T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		107	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	K	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	R	X	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions