Job Description P0A8W2 Confidence 98.61% Date Thu Jan 5 11:08:50 GMT 2012 Rank 73 Aligned Residues 104 % Identity 14% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																	.	.	.	.																																						.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.																																						.	.	.	.	.	.	.	.
Query Sequence		P	L	E	L	T	Q	T	H	W	V	T	L	H	N	I	H	Q	L	P	P	D	Q	S	Q	I	Q	L	A	K	A	I	.	.	.	.	G	I	E	Q	P	S	L	V	R	T	L	D	Q	L	E	E	K	G	L	I	S	R	Q	T	C	A	S	D	R	R	A	K	R	I	K	L	T	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.																																						.	.	.	.	.	.	.	.
Alig confidence																						.											.	.	.	.																										.	.	.										.	.	.	.	.	.	.	.
Template Conservation																						.																																								.	.	.
Template Sequence		Q	V	E	I	S	X	A	E	W	D	V	X	N	I	I	W	D	K	K	S	.	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	S	.	.	.	E	N	I	Y	F	Y	S	S	N	I	K	E	D	D	I	K	X
Template Known Secondary structure																			S	S	S	.												T	T	S																	T	T	S							.	.	.	T	T								S
Template Predicted Secondary structure																						.																																								.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		E	K	A	E	P	L	I	S	E	M	E	A	V	I	N	K	T	R	A	E	I	L	.	.	.	H	G	I	S	A	E	E	L	E	Q	L	I	T	L	I	A	K	L
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		K	T	A	K	T	F	L	N	K	L	Y	G	G	D	X	K	S	L	V	L	N	F	A	K	N	E	E	L	N	N	K	E	I	E	E	L	R	D	I	L	N	D	I
Template Known Secondary structure													T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions