Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8W2
Confidence99.92%DateThu Jan 5 11:08:50 GMT 2012
Rank11Aligned Residues139
% Identity24%Templated1lj9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  SPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCA
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Template Sequence  TDILREIGMIARALDSISNIEFKELSLTRGQYLYLVRVCE. NPGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDA
Template Known Secondary structure 

TGGGT
TTT.STTT

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S
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   2.......10.........20.........30.........40. ........50.........60.........70.........80
 
   83......90.........100.........110.........120.........130.........140..
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Query Sequence  SDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQA
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Template Sequence  SNKKIKRIYATEKGKNVYPIIVRENQHSNQVALQGLSEVEISQLADYLVRMRKNVSEDWE
Template Known Secondary structure  S
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TTT

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   81........90.........100.........110.........120.........130.........140
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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