Job Description P0A8W2 Confidence 97.37% Date Thu Jan 5 11:08:50 GMT 2012 Rank 126 Aligned Residues 76 % Identity 17% Template c3t1bB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: crystal structure of the full-length aphb n100e variant Resolution 2.70 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		L	T	Q	T	H	W	V	T	L	H	N	I	H	Q	L	P	P	D	Q	S	Q	I	Q	L	A	K	A	I	G	I	E	Q	P	S	L	V	R	T	L	D	Q	L	E	E	.	.	.	K	G	L	I	S	R	Q	T	C	A	S	D	R	R	A	K	R	I	K	L	T	E	K	A	E	P	L	I	S	E	M	E	A
Query Conservation																																														.	.	.
Alig confidence																		.	.	.																										.	.	.						.	.	.	.	.	.	.
Template Conservation																		.	.	.																																		.	.	.	.	.	.	.
Template Sequence		M	K	L	D	D	L	N	L	F	R	L	V	V	E	N	G	.	.	.	S	Y	T	S	T	S	K	K	T	M	I	P	V	A	T	I	T	R	R	I	Q	A	L	E	D	S	L	N	L	R	L	L	N	.	.	.	.	.	.	.	R	H	A	R	K	L	T	L	T	E	A	G	E	R	F	Y	K	D	C	S	P
Template Known Secondary structure																	S	.	.	.	S																											T						.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																		.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		106	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	K	T	R	A	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	R	L	A	S	M	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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