Job Description P0A8W2 Confidence 97.49% Date Thu Jan 5 11:08:50 GMT 2012 Rank 116 Aligned Residues 72 % Identity 17% Template c3l9fD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative uncharacterized protein smu.1604c; PDBTitle: the crystal structure of smu.1604c from streptococcus mutans ua159 Resolution 1.80 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																															.	.
Query SS confidence																											.	.	.	.	.	.	.	.																															.	.
Query Sequence		T	H	W	V	T	L	H	N	I	H	Q	L	P	P	D	Q	S	Q	I	Q	L	A	K	A	I	.	.	.	.	.	.	.	.	G	I	E	Q	P	S	L	V	R	T	L	D	Q	L	E	E	K	G	L	I	S	R	Q	T	C	A	S	D	R	R	.	.	A	K	R	I	K	L	T	E	K	A	E	P	L	I	S
Query Conservation																											.	.	.	.	.	.	.	.																															.	.
Alig confidence													.			.											.	.	.	.	.	.	.	.																															.	.
Template Conservation													.			.
Template Sequence		G	K	D	I	I	L	G	I	L	S	K	.	K	E	.	R	S	G	Y	E	I	N	D	I	L	Q	N	Q	L	S	Y	F	Y	D	G	T	Y	G	M	I	Y	P	T	L	R	K	L	E	K	D	G	K	I	T	K	E	V	V	I	Q	D	G	R	P	N	K	N	I	Y	A	I	T	E	S	G	K	K	E	L	A
Template Known Secondary structure											S	S	.	S		.													T	S	T	T	T					S	S												T	T	S									T	T	S
Template Predicted Secondary structure													.			.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.		.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		102	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions