Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8W2
Confidence88.64%DateThu Jan 5 11:08:50 GMT 2012
Rank295Aligned Residues42
% Identity17%Templatec3klnC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:transcriptional regulator, luxr family; PDBTitle: vibrio cholerae vpst
Resolution3.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70...
Predicted Secondary structure 











Query SS confidence 












































Query Sequence  LTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEK
Query Conservation 

  
  

  
       
  


  
      

  
  
   
Alig confidence 













...



























Template Conservation 

 

  

  
  ...
 
   

  
 

  

  

  
  
Template Sequence  LTKREQQIIKLLGS. . . GASNIEIADKLFVSENTVKTHLHNVFKK
Template Known Secondary structure  S
T...T

TTTT

Template Predicted Secondary structure  ...





Template SS confidence 












































   159160.........170.. .......180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions