Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8W2
Confidence99.93%DateThu Jan 5 11:08:50 GMT 2012
Rank4Aligned Residues138
% Identity25%Templatec3e6mD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:marr family transcriptional regulator; PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQT
Query Conservation 
   
   
  
           
   


  
  

  
       
  


  
      

  
  
   


 
  
Alig confidence 












































.

































Template Conservation 
   
   
                  


  
  

  
     . 
  


  
      

  
  
   


 
  
Template Sequence  LNSFLPYLLTRITHIWSSELNQALASEKLPTPKLRLLSSLSAYGE. LTVGQLATLGVXEQSTTSRTVDQLVDEGLAARSI
Template Known Secondary structure  TT
TGGGT

S
.TTS
TTS
Template Predicted Secondary structure 






.




Template SS confidence 















































































   20.........30.........40.........50.........60.... .....70.........80.........90........
 
   81........90.........100.........110.........120.........130.........
Predicted Secondary structure 










Query SS confidence 


























































Query Sequence  CASDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIE
Query Conservation     
 
   
 

  
                     
   
       
  
   
  
Alig confidence 


























































Template Conservation     
 
   
 

  
                     
  

   
   
  
  
  
Template Sequence  SDADQRKRTVVLTRKGKKKLAEISPLINDFHAELVGNVDPDKLQTCIEVLGEILKGKTD
Template Known Secondary structure 
SSSS


TSSS

Template Predicted Secondary structure 














Template SS confidence 


























































   99100.........110.........120.........130.........140.........150.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions