Job Description P0A8W2 Confidence 89.20% Date Thu Jan 5 11:08:50 GMT 2012 Rank 288 Aligned Residues 79 % Identity 15% Template c2xznT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:rps19e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.															.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	V	T	L	H	N	I	H	Q	L	P	P	D	Q	S	Q	I	Q	L	A	K	A	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	Q	P	S	L	V	R	T	L	D	Q	L	E	E	K	G	L	I	S	R	Q	T	C	A	S	D	R	R	A	K	R	I	K	L	T	E	K	A	E	P	L
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation														.																																																											.
Template Sequence		A	A	L	A	R	K	V	Y	L	K	P	H	.	T	G	I	S	T	L	K	H	I	F	G	S	N	K	D	R	G	N	L	R	N	K	H	Q	A	C	H	G	K	I	L	R	W	A	L	K	S	L	E	D	L	K	I	I	R	K	D	K	N	S	A	T	K	K	F	S	R	V	.	I	T	K	E	G	M	T	E
Template Known Secondary structure											S	T	T	.										T							S	S	S																						T	T	S					S	S		S	S	S	T	T				.
Template Predicted Secondary structure														.																																																											.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	E	M	E	A	V	I	N	K	T	R	A	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	R	I	A	T	Q	I	A	I	K	Q	R	Q	A
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions