Job Description P0A8W2 Confidence 63.60% Date Thu Jan 5 11:08:50 GMT 2012 Rank 428 Aligned Residues 75 % Identity 15% Template c2pjpA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna Resolution 2.30 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		L	T	Q	T	H	W	V	T	L	H	N	I	H	Q	.	.	L	P	P	D	Q	S	Q	I	Q	L	A	K	A	I	G	I	E	Q	P	S	L	V	R	T	L	D	Q	L	E	E	K	G	L	I	S	R	Q	T	C	A	S	D	R	R	A	K	R	I	K	L	T	E	K	A	E	P	L	I	S	E	M	E	A	V
Query Conservation																.	.
Alig confidence																.	.																																									.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		F	S	E	E	Q	Q	A	I	W	Q	K	A	E	P	L	F	G	D	E	P	W	W	V	R	D	L	A	K	E	T	G	T	D	E	Q	A	M	R	L	T	L	R	Q	A	A	Q	Q	G	I	I	T	A	I	V	K	D	.	.	.	.	.	.	R	Y	Y	R	N	D	R	I	V	E	F	A	N	M	I	R	D	L
Template Known Secondary structure														G	G	G		S	S	S											T	T																T	T	S						T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.							.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
		107	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		561	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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