Job Description P0A8W2 Confidence 96.10% Date Thu Jan 5 11:08:50 GMT 2012 Rank 189 Aligned Residues 79 % Identity 16% Template c2oz6A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:virulence factor regulator; PDBTitle: crystal structure of virulence factor regulator from pseudomonas2 aeruginosa in complex with camp Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.														.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	P	L	G	S	D	L	A	R	L	V	R	I	W	R	A	L	I	D	H	R	L	K	P	L	E	L	T	Q	T	H	W	V	T	L	H	N	I	H	Q	L	P	P	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	I	Q	L	A	K	A	I	G	I	E	Q	P	S	L	V	R	T	L	D
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	E	I	L	Y	T	L	G	S	Q	M	A	D	R	L	R	K	T	T	R	K	V	G	D	L	A	F	L	D	V	T	G	R	V	A	R	T	L	L	D	L	C	Q	Q	P	D	A	M	T	H	P	D	G	M	Q	I	K	I	T	R	Q	E	I	G	R	I	V	G	C	S	R	E	M	V	G	R	V	L	K
Template Known Secondary structure																																												T	T	S	T	T					T	T																T	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	E	E	K	G	L	I	S	R	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	E	E	Q	G	L	V	H	V	K	G
Template Known Secondary structure						T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions