Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8W2
Confidence99.92%DateThu Jan 5 11:08:50 GMT 2012
Rank13Aligned Residues131
% Identity23%Templatec2nnnB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:probable transcriptional regulator; PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQT
Query Conservation 
   
   
  
           
   


  
  

  
       
  


  
      

  
  
   


 
  
Alig confidence 























.



















.

































Template Conservation 
   
  

               .   

  
  

  
     . 
  


         

  
  
   
 
    
Template Sequence  LDDQIGFILRQANQRYAALFANGI. GNGLTPTQWAALVRLGETGP. CPQNQLGRLTAXDAATIKGVVERLDKRGLIQRSA
Template Known Secondary structure  GGG

.SS



S.B
TT

TT
Template Predicted Secondary structure  .






.






Template SS confidence 















































































   910.........20.........30.. .......40.........50.. .......60.........70.........80......
 
   81........90.........100.........110.........120.........130...
Predicted Secondary structure 










Query SS confidence 




















































Query Sequence  CASDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGISAEELEQLITLIAKL
Query Conservation     
 
   
 

  
                     
   
       
  
Alig confidence 




















































Template Conservation     
 
   
 

  
                     
  

       
 

Template Sequence  DPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARL
Template Known Secondary structure  TT
TTS
TT
Template Predicted Secondary structure 











Template SS confidence 




















































   87..90.........100.........110.........120.........130.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions