Job Description P0A8W2 Confidence 97.17% Date Thu Jan 5 11:08:50 GMT 2012 Rank 138 Aligned Residues 76 % Identity 20% Template c1iz1B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:lysr-type regulatory protein; PDBTitle: crystal structure of cbnr, a lysr family transcriptional2 regulator Resolution 2.50 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		L	T	Q	T	H	W	V	T	L	H	N	I	H	Q	L	P	P	D	Q	S	Q	I	Q	L	A	K	A	I	G	I	E	Q	P	S	L	V	R	T	L	D	Q	L	E	E	K	G	.	.	.	L	I	S	R	Q	T	C	A	S	D	R	R	A	K	R	I	K	L	T	E	K	A	E	P	L	I	S	E	M	E	A
Query Conservation																																																.	.	.
Alig confidence																		.	.	.																												.	.	.								.	.	.	.	.	.	.
Template Conservation																		.	.	.																																						.	.	.	.	.	.	.
Template Sequence		M	E	F	R	Q	L	K	Y	F	I	A	V	A	E	A	G	.	.	.	N	M	A	A	A	A	K	R	L	H	V	S	Q	P	P	I	T	R	Q	M	Q	A	L	E	A	D	L	G	V	V	L	L	E	R	S	H	R	.	.	.	.	.	.	.	G	I	E	L	T	A	A	G	H	A	F	L	E	D	A	R	R
Template Known Secondary structure																		.	.	.	S									T	S																	T	S							S	S	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																		.	.	.																																						.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		106	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	K	T	R	A	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	E	L	A	G	R	S	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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