Job Description P76135 Confidence 86.59% Date Thu Jan 5 12:19:26 GMT 2012 Rank 135 Aligned Residues 78 % Identity 12% Template c3dpjB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:transcription regulator, tetr family; PDBTitle: the crystal structure of a tetr transcription regulator2 from silicibacter pomeroyi dss Resolution 1.90 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																												.	.				.
Query SS confidence																																												.	.				.
Query Sequence		N	G	V	L	S	V	S	G	K	V	R	N	I	V	N	M	K	P	A	H	P	W	K	L	K	D	I	C	D	C	L	Y	I	S	E	S	L	L	K	K	K	L	.	.	K	Q	E	.	Q	T	T	F	S	Q	I	L	L	D	A	R	M	Q	H	A	K	N	L	I	R	V	E	G	S	V	N	K	I	A	E	Q
Query Conservation																																												.	.				.
Alig confidence																																												.	.				.
Template Conservation
Template Sequence		Q	T	R	D	Q	I	V	A	A	A	D	E	L	F	Y	R	Q	G	F	A	Q	T	S	F	V	D	I	S	A	A	V	G	I	S	R	G	N	F	Y	Y	H	F	K	T	K	D	E	I	L	A	E	V	I	R	L	R	L	A	R	T	A	Q	X	L	A	D	W	Q	G	T	G	D	S	P	R	A	R	I	A	S
Template Known Secondary structure																				S	T	T											T								T	T		S																										T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		207
Predicted Secondary structure
Query SS confidence
Query Sequence		C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		85

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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