Job Description P76135 Confidence 64.77% Date Thu Jan 5 12:19:26 GMT 2012 Rank 336 Aligned Residues 90 % Identity 12% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.										180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																														.
Query SS confidence																															.	.	.	.	.	.	.	.	.																														.
Query Sequence		W	K	L	K	D	I	C	D	C	L	Y	I	S	E	S	L	L	K	K	K	L	K	Q	E	Q	T	T	F	S	.	.	.	.	.	.	.	.	.	Q	I	L	L	D	A	R	M	Q	H	A	K	N	L	I	R	V	E	G	S	V	N	K	I	A	E	Q	C	G	.	Y	A	S	T	S	Y	F	I	Y	A	F	R
Query Conservation																															.	.	.	.	.	.	.	.	.																														.
Alig confidence																															.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		L	T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	T	L	S	A	K	E	W	K	Q	L	S	S
Template Known Secondary structure												T	S											T	T	S	S						T	T	T						T	T														T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	F	G	N	S	P	K	R	V	S	K	E	Y	R	C	Q	S	H	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	R	E	E	L	D	R	R	I	H	T	L	V	A	L	R	D	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions