Job Description P76135 Confidence 89.88% Date Thu Jan 5 12:19:26 GMT 2012 Rank 84 Aligned Residues 86 % Identity 10% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		G	K	V	R	N	I	V	N	M	K	P	A	H	P	W	K	L	K	D	I	C	D	C	L	Y	I	S	E	S	L	L	K	K	K	L	K	Q	E	Q	T	T	.	.	.	.	.	.	.	.	F	S	Q	I	L	L	D	A	R	M	Q	H	A	K	N	L	I	R	V	E	G	S	V	N	K	I	A	E	Q	C	G
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L	Q
Template Known Secondary structure														T	T											T												S	G	G	G	T	T										S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		209	210		.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		Y	A	.	S	T	S	Y	F	I	Y	A	F	R	K	H
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		L	S	A	S	K	R	T	I	L	N	V	I	K	R	S
Template Known Secondary structure				S												T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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