Job Description P75804 Confidence 99.11% Date Thu Jan 5 12:14:23 GMT 2012 Rank 103 Aligned Residues 331 % Identity 10% Template d1orva1 SCOP info 8-bladed beta-propeller DPP6 N-terminal domain-like DPP6 N-terminal domain-like Resolution 1.80

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.
Query Sequence		V	L	Q	D	K	L	D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	.	.	.	.	.	.	.	.	.	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R
Query Conservation																										.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	D	E	L	G	Y	S	T	N	D	Y	S	V	S	P	D	R	Q	F	I	L	F	E	Y	N	Y	V	K	Q	W	R	H	S	Y	T	A	S	Y	D	I	Y	D	L	N	K	R	Q	L	I	.	.	.	.	.	.	.	.	.	.	.	T	E	E	R	I	P	N	N	T	Q	W	I	T	W	S	P	V	G	H
Template Known Secondary structure							S	S									T	T	S	S												S	S	S											T	T	T	T				.	.	.	.	.	.	.	.	.	.	.		S	S				T	T	B	S						S	S	T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.												.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		K	L	A	Y	.	V	W	N	N	D	I	Y	V	K	N	E	P	N	L	S	S	Q	R	I	T	W	T	G	K	E	N	V	I	Y	N	G	V	T	D	W	V	Y	E	E	E	V	F	S	A	Y	S	A	L	W	W	S	P	N	G	T	F	L	A	Y	A	Q	F	N	D	T	E	V	P	L	I	E	Y	S	F	Y
Template Known Secondary structure						.			T	T						S	S	T	T	S							S			B	T	T	T				S	B									T	T	S	S	S	B						T	T	S	S										T	T	S
Template Predicted Secondary structure						.
Template SS confidence
		163	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	E	S	L	Q	Y	P	K	T	V	R	I	P	Y	P	K	A	G	A	E	N	P	T	V	K	F	F	V	V	D	T	R	T	L	S	P	N	A	S	V	T	S	Y	Q	I	V	P	P	A	S	V	L	I	G	D	H	Y	L	C	G	V	T	W	V	T	E	E	R	I	S	L	Q	W	I	R	R	A	Q	N
Template Known Secondary structure			S	T	T		S	S											T	T	S												G	G	G			T	T	S															T	S												T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.								.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	.	.	.	.	.	.	.	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	I	I	D	I	C	D	Y	D	E	S	T	G	R	W	I	S	S	V	A	R	Q	H	I	E	I	S	T	T	G	W	V	G	R	F	R	P	A	E	P	H	F	T	S	D	G	N	S	F	Y	K	I	I	S	N	E	E	G	Y	K	H	I	C	H	F	Q	T	D	K	S	N	C	T	F	I	T	K	G	A
Template Known Secondary structure												T	T	T	T						G	G	G							S	S	S		S	S	S	S	S								T	T	S	S									T	T	S									T	T		S					S			S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
					298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure		.	.	.																					.	.	.	.	.	.																	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																					.	.	.	.	.	.																	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	.	.	.	.	.	.	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	.	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.																					.	.	.	.	.	.																	.																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																					.	.	.	.	.	.																	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	E	V	I	G	I	E	A	L	T	S	D	Y	L	Y	Y	I	S	N	E	H	K	G	M	P	G	G	R	N	L	Y	R	I	Q	L	N	D	Y	T	K	V	T	C	L	S	C	E	L	N	P	E	R	C	Q	Y	Y	S	A	S	F	S	N	K	A	K	Y	Y	Q	L	R	C	F	G	P	G	L	P	L	Y	T
Template Known Secondary structure		S										S	S							S		G	G	G		T	T		B							T	T								S	S	T	T	T	S	T	T	T	B		B							T	T	S	S								S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	E	S	S	G	E	L	L	K	V	S	P	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	S	S	S	S	D	K	E	L	R	V	L	E	D	N
Template Known Secondary structure					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions