Phyre 2 alignment of P75804 with d1jofa

Job Description P75804
Confidence 98.88% Date Thu Jan 5 12:14:23 GMT 2012

Rank 123 Aligned Residues 296

% Identity 11% Template d1jofa_

SCOP info 7-bladed beta-propeller 3-carboxy-cis,cis-mucoante lactonizing enzyme 3-carboxy-cis,cis-mucoante lactonizing enzyme

Resolution 2.50

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																				.																									.
Query SS confidence																				.																									.
Query Sequence	E	V	L	Q	D	K	L	D	H	P	W	A	L	A	F	L	P	D	N	.	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	.	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S
Query Conservation																				.																									.
Alig confidence																				.																									.
Template Conservation
Template Sequence	R	T	E	I	P	Q	D	E	P	I	S	W	X	T	F	D	H	E	R	K	N	I	Y	G	A	A	X	K	K	W	S	S	F	A	V	K	S	P	T	E	I	V	H	E	A	S	H	P	I	G	G	H	P	R	A	N	D	A	D	T	N	T	R	A	I	F	L	L	A	A	K	Q	P	P	Y	A	V	Y	A	N
Template Known Secondary structure						T	T				S						T	T	S	S							B	T										T	T												S	S	G	G	G	G		T	T	S											S	S	T	T
Template Predicted Secondary structure
Template SS confidence
	33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

	106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																																					.
Template Conservation																													.	.	.	.	.	.	.	.	.																																					.
Template Sequence	P	F	Y	K	F	A	G	Y	G	N	V	F	S	V	S	E	T	G	K	L	E	K	N	V	Q	N	Y	E	.	.	.	.	.	.	.	.	.	Y	Q	E	N	T	G	I	H	G	X	V	F	D	P	T	E	T	Y	L	Y	S	A	D	L	T	A	N	K	L	W	T	H	R	K	L	A	.	S	G	E	V	E	L
Template Known Secondary structure			S	S	S											T	T												.	.	.	.	.	.	.	.	.			T	T										T	T	S	S							T	T	T	T									T	.	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
	113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140										.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.

	186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	V	G	S	V	D	A	P	D	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	P	R	W	V	A	X	H	P	T	G	N	Y	L	Y	A	L	X	E	A	G	N	R	I	C	E	Y	V	I	D	P	A	T	H	X	P	V	Y	T	H	H	S	F	P	L	I	P	P	G	I	P
Template Known Secondary structure							S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S	S							T	T	T	T									T	T	T												S	S		T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	183	.	.	.	.	.	.	190	.	.																			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

	266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.						.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.															.	.	.
Query SS confidence																																																					.	.	.	.	.															.	.	.
Query Sequence	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	.	.	.	.	.	V	I	V	M	S	V	N	G	D	K	V	T	E	D	.	.	.	G	R	I	L	T	D
Query Conservation																																																					.	.	.	.	.															.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.											.	.	.	.	.															.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Sequence	D	R	D	P	.	.	.	.	.	.	.	.	.	.	.	.	E	T	G	K	G	L	Y	R	A	D	V	C	A	L	T	F	S	G	K	Y	.	.	.	.	.	.	X	F	A	S	S	R	A	N	K	F	E	L	Q	G	Y	I	A	G	F	K	L	R	D	C	G	S	I	E	K	Q	L	F	L	S	P	T	P	T
Template Known Secondary structure		B		T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	B	S										T	T	S	S		.	.	.	.	.	.								S	S	T	T	S											T	T	S												S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template SS confidence
	245	.	.	.													.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

	338	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.
Predicted Secondary structure													.														.	.
Query SS confidence													.														.	.
Query Sequence	R	G	Q	R	I	R	D	V	R	T	G	P	.	D	G	Y	L	Y	V	L	T	D	E	S	S	G	.	.	E	L	L	K	V	S	P
Query Conservation													.														.	.
Alig confidence													.														.	.
Template Conservation
Template Sequence	S	G	G	H	S	N	A	V	S	P	C	P	W	S	D	E	W	X	A	I	T	D	D	Q	E	G	W	L	E	I	Y	R	W	K	D
Template Known Secondary structure			T	T								T	T		T	T							S	S	S										T
Template Predicted Secondary structure
Template SS confidence
	307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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