Job Description P75804 Confidence 79.65% Date Thu Jan 5 12:14:23 GMT 2012 Rank 173 Aligned Residues 266 % Identity 11% Template c3s25A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical 7-bladed beta-propeller-like protein; PDBTitle: crystal structure of a hypothetical 7-bladed beta-propeller-like2 protein (eubrec_1955) from eubacterium rectale atcc 33656 at 1.88 a3 resolution Resolution 1.88 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	.	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V
Query Conservation																	.
Alig confidence																	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	F	C	E	S	D	G	E	V	F	F	S	N	T	N	D	N	G	R	L	Y	A	X	N	I	D	G	S	N	I	H	K	L	S	N	D	T	A	X	Y	I	N	A	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	V	Y	Y	V	R	N	N	N	T	F	F	S	Y	D	R	N	S	L
Template Known Secondary structure		T						T	T							G	G	G	T	T							T	T	S		S																S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												S	S			S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.															.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Sequence		C	R	I	K	R	N	G	H	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	L	D	P	D	P	C	I	Y	A	S	L	I	G	N	Y	I	Y	Y	L	H	Y	D	T	Q	T	A	T	S	L	Y	R	I	R	I	D	G	E	.	.	.	.	.	.
Template Known Secondary structure						T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S									T	T								S	S	S	S									T	T	S		.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.																										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	E	K	K	K	I	K	N	H	Y	L	F	T	C	N	T	S	D	R	Y	F	Y	Y	N	N	P	K	N	G	Q	.	.	.	L	Y	R	Y	D	T	A	S	Q	S	E	A	L	F	Y	D	C	N	C	Y	K	P	V	V	L	D	D	T	N	V	Y	Y	X	D	V	N	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.							S	S					S				T	T							T	T	T			.	.	.						T	T	T	T								S										T	T							G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
													168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	.	.	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V
Query Conservation																											.	.
Alig confidence																											.	.																																.	.	.	.	.	.												.
Template Conservation																																																												.	.	.	.	.	.												.
Template Sequence		D	N	A	I	V	H	V	N	I	N	N	P	N	P	V	V	L	T	E	A	N	I	E	H	Y	N	V	Y	G	S	L	I	F	Y	Q	R	G	G	D	N	P	A	L	C	V	V	K	N	D	G	T	G	F	K	E	L	A	K	.	.	.	.	.	.	G	E	F	C	N	I	N	V	T	S	Q	.	Y	V	Y	F
Template Known Secondary structure		T	T							S	S	S							S		S									T	T								S	S	S								T	T	S									.	.	.	.	.	.	S									S	S	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.												.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.		.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	E	S	S	G	E	L	L	K	V	S	P	R	N
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		T	.	D	F	V	S	N	K	E	Y	C	T	S	T	Q	N
Template Known Secondary structure			.		T	T	T								S	S	S
Template Predicted Secondary structure			.
Template SS confidence
		307		.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions