Job Description P75804 Confidence 97.19% Date Thu Jan 5 12:14:23 GMT 2012 Rank 154 Aligned Residues 287 % Identity 14% Template c3q6kA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:43.2 kda salivary protein; PDBTitle: salivary protein from lutzomyia longipalpis Resolution 2.52 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	.	.	.	.	.	.	.	.	.	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	A	F	A	Y	D	A	E	G	E	K	L	F	L	A	V	P	R	K	L	P	R	V	P	Y	T	L	A	E	V	D	T	K	N	S	L	G	V	K	G	K	H	S	P	L	L	N	K	F	S	G	H	K	T	G	K	E	L	T	S	I	Y	Q	P	V	I	D	D	C	R	R	L	W	V	V	D	I	G	S
Template Known Secondary structure									T	T	T	T								T	T	S	T	T		S		S										T	T		T	T		S	S			B				T	T		S	S	S		S	S	S									T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																																							.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.																																							.	.	.	.	.	.	.	.
Query Sequence		G	D	D	G	K	A	G	T	A	V	.	.	.	.	.	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	.	.	.	.	.	.	.	.	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q
Query Conservation												.	.	.	.	.																																							.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																																							.	.	.	.	.	.	.	.																			.
Template Conservation																																																																																	.
Template Sequence		V	E	Y	R	S	R	G	A	K	D	Y	P	S	H	R	P	A	I	V	A	Y	D	L	K	Q	P	N	Y	P	E	V	V	R	Y	Y	F	P	T	R	L	V	E	K	P	T	Y	F	G	G	F	A	V	D	V	A	N	P	K	G	D	C	S	E	T	F	V	Y	I	T	N	F	L	R	G	A	L	F	I	Y	.
Template Known Secondary structure			S	S		S	T	T	G	G	G	S												S	S	S	T	T											G	G	G				G	G	G									S		T	T	T	T	S		S								T	T	T	T						.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	.	.	.	.	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y
Query Conservation																																																					.	.	.	.
Alig confidence		.	.																																				.	.	.	.											.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	D	H	K	K	Q	D	S	W	N	V	T	H	P	T	F	K	A	E	R	P	T	K	F	D	Y	G	G	K	E	Y	E	F	K	A	G	.	.	.	.	I	F	G	I	T	L	G	D	R	D	S	E	G	N	R	P	A	Y	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.		T	T	T	T								G	G	G	S			S							T	T									.	.	.	.											T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E
Query Conservation
Alig confidence		.	.	.	.																																													.	.	.	.	.	.
Template Conservation		.	.	.	.																																													.	.	.	.	.	.
Template Sequence		.	.	.	.	A	G	S	A	I	K	V	Y	S	V	N	T	K	E	L	K	Q	K	G	G	K	L	N	P	E	L	L	G	N	R	G	K	Y	N	D	A	I	A	L	A	Y	D	P	K	.	.	.	.	.	.	T	K	V	I	F	F	A	E	A	N	T	K	Q	V	S	C	W	N	T	Q	K	M	P	L	R	M
Template Known Secondary structure		.	.	.	.		S	S		S											S	S	T	T													T	T										T	T	.	.	.	.	.	.	T								S	S	S	S							T	T	S		S	B		G
Template Predicted Secondary structure		.	.	.	.																																													.	.	.	.	.	.
Template SS confidence
						242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		331	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		D	G	R	I	L	.	.	.	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		K	N	T	D	V	V	Y	T	S	S	R	F	V	F	G	T	D	I	S	V	D	S	K	G	G	L	W	F	M	S	N	G
Template Known Secondary structure		G	G								T	T			S								T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions