Job Description P75804 Confidence 99.17% Date Thu Jan 5 12:14:23 GMT 2012 Rank 95 Aligned Residues 297 % Identity 9% Template c3pe7A_ PDB info PDB header:lyase Chain: A: PDB Molecule:oligogalacturonate lyase; PDBTitle: oligogalacturonate lyase in complex with manganese Resolution 1.65 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		A	F	L	P	D	N	H	G	M	L	I	T	L	R	.	.	.	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V
Query Conservation																.	.	.
Alig confidence																.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		C	F	T	R	D	G	S	K	L	L	F	G	G	A	F	D	G	P	W	N	Y	Y	L	L	D	L	N	T	Q	V	A	T	Q	L	T	.	.	.	.	.	.	.	.	.	.	E	G	R	G	D	N	T	F	G	G	F	L	S	P	D	D	D	A	L	F	Y	V	K	D	G	R	N	L	M	R	V	D	L	A	T
Template Known Secondary structure			B		T	T	S									T	T	S	S								T	T	T								.	.	.	.	.	.	.	.	.	.		S	S		B		S	S	S					T	T	S	S							T	T	T							T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.											.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.
Template Sequence		L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	V	Y	Q	V	P	A	E	W	V	G	Y	G	T	W	V	A	N	S	D	C	T	K	L	V	G	I	E	I	R	R	E	D	W	V	P	L	T	D	W	K	K	F	H	E	F	Y	F	T	K	P	C	C	R	L	.	.	.	.	M
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T											T	T	S	S									G	G	G						S								G	G	G							.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.
Template SS confidence
		112	.	.																	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	.	.	.	.	.	.	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G
Query Conservation																																																		.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	D	L	K	T	G	E	S	T	V	I	L	Q	E	N	Q	W	L	G	H	P	I	Y	R	P	Y	D	D	S	T	V	A	F	C	H	E	G	P	H	D	L	V	D	A	R	M	W	L	I	N	E	D	G	T	N	M	R	K	V	K	T	H	A	E	G	E	S	C	T	H	E	F	W	V	P	D	G	S	A
Template Known Secondary structure					T	T	T										S	S									T	T											S		T	T	T	S	S		S						T	T	S						S					T	T										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		272	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.					.	.	320	.	.	.	.	.	.	.	.	.	330								.	.
Predicted Secondary structure					.	.	.	.	.																													.	.	.																.	.	.	.														.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.																													.	.	.																.	.	.	.														.	.	.	.	.	.	.
Query Sequence		E	I	V	.	.	.	.	.	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	.	.	.	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	.	.	.	.	V	I	V	M	S	V	N	G	D	K	V	T	E	.	.	.	.	.	.	.	D	G
Query Conservation					.	.	.	.	.																													.	.	.																.	.	.	.														.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.																													.	.	.																.	.	.	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	Y	V	S	Y	L	K	G	S	P	D	R	F	I	Y	S	A	D	P	E	T	L	E	N	R	Q	L	T	S	M	P	A	C	S	H	L	M	S	N	Y	D	G	S	L	M	V	G	D	G	S	D	A	E	N	D	P	F	L	Y	V	F	N	M	K	N	G	T	Q	H	R	V	A	R	H	D	T	S	W	K
Template Known Secondary structure									T	T											T	T	T																			T	T	S	S																				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	.	.	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V
Query Conservation																						.	.
Alig confidence																						.	.
Template Conservation
Template Sequence		V	F	E	G	D	R	Q	V	T	H	P	H	P	S	F	T	P	D	D	K	Q	I	L	F	T	S	D	V	H	G	K	P	A	L	Y	L	A
Template Known Secondary structure			B	T	T	B	S	S	T	T								T	T	S	S								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions