Job Description P75804 Confidence 92.99% Date Thu Jan 5 12:14:23 GMT 2012 Rank 165 Aligned Residues 79 % Identity 16% Template c3pbpD_ PDB info PDB header:transport protein,structural protein Chain: D: PDB Molecule:nucleoporin nup82; PDBTitle: structure of the yeast heterotrimeric nup82-nup159-nup116 nucleoporin2 complex Resolution 2.60 Å

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		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.								.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.																		.
Query SS confidence																																																		.	.	.	.	.	.	.																		.
Query Sequence		S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	.	.	.	.	.	.	.	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	.	Y	L	Y	V	L	T	D
Query Conservation																																																		.	.	.	.	.	.	.																		.
Alig confidence																.	.	.	.																															.	.	.	.	.	.	.																		.
Template Conservation																.	.	.	.
Template Sequence		K	S	S	I	K	K	V	L	F	H	P	K	S	Y	.	.	.	.	R	D	S	C	I	V	V	L	K	E	D	D	T	I	T	X	F	D	I	L	N	S	Q	E	K	P	I	V	L	N	K	P	N	N	S	F	G	L	D	A	R	V	N	D	I	T	D	L	E	F	S	K	D	G	L	T	L	Y	C	L	N	T
Template Known Secondary structure												T	T	B	G	.	.	.	.	G	G								T	T	S							T	T		T	T	S						S							S	S		S	S											T	T	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	S	G	E	L	L	K	V	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	G	G	D	I	F	A	F	Y	P
Template Known Secondary structure		T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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