Phyre 2 alignment of P75804 with c3kyaA

Job Description P75804
Confidence 99.74% Date Thu Jan 5 12:14:23 GMT 2012

Rank 23 Aligned Residues 316

% Identity 12% Template c3kyaA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative phosphatase; PDBTitle: crystal structure of putative phosphatase (np_812416.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.77 a resolution

Resolution 1.77 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	33	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence	K	L	D	H	P	W	A	L	A	F	L	P	D	N	H	.	.	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence	G	F	S	D	N	G	R	L	A	F	D	P	L	N	K	D	H	L	Y	I	C	Y	D	G	H	K	A	I	Q	L	I	D	L	K	N	R	X	L	S	S	P	L	N	I	N	T	I	P	T	N	R	I	R	S	I	A	F	N	K	K	I	E	G	Y	A	D	E	A	E	Y	X	I	V	A	I	D	Y	D	G	K
Template Known Secondary structure				S								T	T											T									T	T	T	T									T	T	S	S		S	B										B	T	T	T	B		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
	159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

	111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G
Query Conservation
Alig confidence																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence	G	D	E	S	P	S	V	Y	I	I	K	R	N	A	D	G	T	F	D	D	.	.	.	.	.	.	R	S	D	I	Q	L	I	A	A	Y	K	Q	C	N	G	A	T	I	H	P	I	N	G	E	L	Y	F	N	S	Y	E	K	G	Q	V	F	R	L	D	L	V	D	Y	F	K	T	I	K	N	G	G	S	W	D
Template Known Secondary structure	G	G	G											T	T	S			S	T	.	.	.	.	.	.	T	S									S									T	T	T								T	T	T	T																T	T
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
	239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

	191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K
Query Conservation
Alig confidence							.	.	.	.																																																																						.
Template Conservation							.	.	.	.																																																																						.
Template Sequence	P	I	V	K	N	N	.	.	.	.	P	N	T	F	K	Q	L	F	T	I	A	D	P	S	W	E	F	Q	I	F	I	H	P	T	G	K	Y	A	Y	F	G	V	I	N	N	H	Y	F	X	R	S	D	Y	D	E	I	K	K	E	F	I	T	P	Y	N	F	V	G	G	Y	K	Q	S	G	Y	R	D	D	V	.
Template Known Secondary structure		B	G	G	G		.	.	.	.	T	T	T								S	S	S	S									T	T	S	S							T	T	T	T									T	T	T	T											B	T	T	B				B			B	.
Template Predicted Secondary structure							.	.	.	.																																																																						.
Template SS confidence
	313	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

	271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	.	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.																						.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	G	T	E	A	R	X	N	N	P	C	Q	G	V	F	V	K	N	P	D	Y	T	G	E	E	E	Y	D	F	Y	F	V	D	R	L	N	F	C	V	R	K	V	T	P	E	G	I	V	S	T	Y	A	G	R	G	A	S	T	S	L	A	D	G	N	Q	W	G	T	D	D
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	G	G	G		B		S	S										T	T			S	S										G	G	G	T							T	T		B							S		T	T						S		S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.

			333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure	.	.																		.
Query SS confidence	.	.																		.
Query Sequence	.	.	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	.	D	G	Y	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V	S	P	R	N
Query Conservation	.	.																		.
Alig confidence	.	.																		.								.
Template Conservation																												.
Template Sequence	G	D	L	R	E	V	A	R	F	R	D	V	S	G	L	V	Y	D	D	V	K	E	X	F	Y	V	H	.	D	Q	V	G	H	T	I	R	T	I	S	X	E	Q
Template Known Secondary structure			T	T	T	T				S	S								T	T	T	T						.		T	T	T	T
Template Predicted Secondary structure																												.
Template SS confidence
	457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.		.	.	.	.	.	.	490	.	.	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions