Job Description P75804 Confidence 59.39% Date Thu Jan 5 12:14:23 GMT 2012 Rank 177 Aligned Residues 256 % Identity 15% Template c3iumA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state Resolution 2.25 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	.	.	.	.	.	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		Q	L	S	F	S	R	D	G	R	I	L	A	Y	S	L	S	L	A	G	S	D	W	R	E	I	H	L	X	D	V	E	S	K	Q	P	L	E	T	P	L	K	D	V	K	F	S	.	.	.	.	.	.	.	.	.	.	.	G	I	S	W	L	G	N	E	G	F	F	Y	S	S	Y	D	K	P	T	D	Q	H	.
Template Known Secondary structure							T	T	S	S									T	T		S									T	T	T	T												S		.	.	.	.	.	.	.	.	.	.	.						T	T	T							S	S							.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.												.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	.	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I
Query Conservation																																																				.
Alig confidence		.	.	.	.	.																											.	.	.																	.
Template Conservation		.	.	.	.	.																											.	.	.
Template Sequence		.	.	.	.	.	K	V	Y	F	H	R	L	G	T	A	Q	E	D	D	R	L	V	F	G	A	I	P	A	Q	H	H	.	.	.	R	Y	V	G	A	T	V	T	E	D	D	R	F	L	L	I	S	A	A	N	S	T	S	G	N	R	L	Y	V	K	D	L	S	Q	E	N	A	P	L	L	T	V	Q	G	D	L
Template Known Secondary structure		.	.	.	.	.							T	T	S		G	G	G						S		S	G	G	G			.	.	.	S								T	T	S									S	S	S	S									T	T	S	T	T									S	S
Template Predicted Secondary structure		.	.	.	.	.																											.	.	.
Template SS confidence
							206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	D	V	S	L	V	D	N	K	G	S	T	L	Y	L	L	T	N	R	.	.	.	.	.	.	.	.	.	D	A	P	N	R	R	L	V	T	V	D	A	A	N	P	G	P	A	H	W	R	D	L	I	P	E	R	Q	Q	V	L	T	V	H	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S									T	T								T	.	.	.	.	.	.	.	.	.	T		T	T								T	T	S			G	G	G									S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.										.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	Y	L	F	A	E	Y	X	V	D	A	T	A	R	V	E	Q	F	D	Y	E	G	K	R	V	R	E	V	A	L	P	G	L	G	S	.	V	S	G	F	N	G	K	H	D	D	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									T	T									T	T	S									S	S	S	S		.								T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
																																		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380
					353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V	S	P	R	N
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		A	L	Y	F	G	F	E	N	Y	A	Q	P	P	T	L	Y	R	F	E	P	K	S
Template Known Secondary structure		S								T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions