Job Description P75804 Confidence 99.42% Date Thu Jan 5 12:14:23 GMT 2012 Rank 55 Aligned Residues 307 % Identity 12% Template c3i2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 92; PDBTitle: crystal structure of wd40 repeats protein wdr92 Resolution 1.95 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																						.	.	.
Query SS confidence																									.	.																																						.	.	.
Query Sequence		D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	.	.	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	.	.	.	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D
Query Conservation																									.	.																																						.	.	.
Alig confidence																									.	.																	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	V	F	D	C	K	W	V	P	C	S	A	K	F	V	T	M	G	N	R	G	T	G	V	I	Q	L	Y	E	I	Q	H	G	D	L	K	L	L	R	E	.	.	.	.	.	.	.	.	.	I	E	K	A	K	P	I	K	C	G	T	F	G	A	T	S	L	Q	Q	R	Y	L	A	T	G	D	F	G	G	N
Template Known Secondary structure		S									T	T	S	S																				S	S	S							.	.	.	.	.	.	.	.	.				S	S								T	T			T	T	T								T	T	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	I	W	N	L	E	.	.	.	.	.	.	.	.	.	.	.	A	P	E	M	P	V	Y	S	V	K	G	H	K	E	I	I	N	A	I	D	G	I	G	G	L	G	I	G	E	G	A	P	E	I	V	T	G	S	R	D	G	T	V	K	V	W	D	P	R	Q	K	D	D	P	V	A	N	M	E	P	V	Q
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.	.	.	.	S		S	S		S							S	S									S	G	G	G			.										T	T	S							T	T	S		S	S		S							T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.												.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		G	E	I	P	D	D	N	P	F	I	.	.	.	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I
Query Conservation												.	.	.
Alig confidence												.	.	.																																																															.	.
Template Conservation																																																																													.	.
Template Sequence		G	E	N	K	R	D	C	W	T	V	A	F	G	N	A	Y	N	Q	E	E	R	V	V	C	A	G	Y	D	N	G	D	I	K	L	F	D	L	R	N	M	A	L	R	W	E	T	N	I	K	N	G	V	C	S	L	E	F	D	R	K	D	I	S	M	N	K	L	V	A	T	S	L	E	G	K	.	.	F	H	V
Template Known Secondary structure		T	S																.										T	T	S							T	T	T	T									S	S								S		S	S	S	S									S	T	T		.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.															.	.	.	330	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	T	E	D	G
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		F	D	M	R	T	Q	H	P	T	K	G	F	A	S	V	S	E	K	A	H	K	S	T	V	W	Q	V	R	H	L	P	Q	.	.	.	.	.	.	N	R	E	L	F	L	T	A	G	G	A	G	G	L	H	L	W	K	Y	E	Y	P	I	Q	R	K	D	S	E	G	I	E	M	G	V	A	G	S	V	S	L	L
Template Known Secondary structure									T	T	T											S	S									T	T	.	.	.	.	.	.										T	T	S											S					T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G	.	.	E	L	L	K	V	S	P
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		Q	N	V	T	L	S	T	Q	P	I	S	S	L	D	W	S	P	D	K	R	G	L	C	V	C	S	S	F	D	Q	T	V	R	V	L	I	V	T	K
Template Known Secondary structure								S	S									S	S	S	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions