Job Description P75804 Confidence 98.57% Date Thu Jan 5 12:14:23 GMT 2012 Rank 137 Aligned Residues 287 % Identity 9% Template c3hxjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyrrolo-quinoline quinone; PDBTitle: crystal structure of pyrrolo-quinoline quinone (pqq_dh) from2 methanococcus maripaludis, northeast structural genomics consortium3 target mrr86 Resolution 2.00 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G
Query Conservation
Alig confidence									.																						.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation									.																						.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	A	K	N	G	T	.	I	Y	L	G	S	S	N	K	N	L	Y	A	I	N	T	D	G	S	V	K	W	.	.	.	.	.	.	.	.	.	.	.	F	F	K	S	G	E	I	I	E	C	R	P	S	I	G	K	D	G	T	I	Y	F	G	.	.	.	.	.	.	.	.	.	.	S	D	K	V	Y	A	I
Template Known Secondary structure					T	T	S		.				S	S	T	T	T	T	T					T	T	S					.	.	.	.	.	.	.	.	.	.	.	S	S		G	G	G									T	T	T	T					S	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure									.																						.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.												.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.											.	.	.	80	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K
Query Conservation
Alig confidence																																																																									.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		N	P	D	G	T	E	K	W	R	F	D	T	S	D	F	T	I	F	E	D	I	L	Y	V	T	S	X	D	G	H	L	Y	A	I	N	T	D	G	T	E	K	W	R	F	K	T	K	K	A	I	Y	A	T	P	I	V	S	E	D	G	T	I	Y	V	G	S	N	D	N	Y	L	.	.	.	.	.	Y	A	I	N
Template Known Secondary structure					G	G	G	G	G	G	S									T	T							T	T	S							T	T	S									S	S				S						T	T	S							T	T	S			.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		P	D	G	T	E	K	W	R	F	K	T	N	D	A	I	T	S	A	A	S	I	G	K	D	G	T	I	Y	F	G	S	D	K	.	.	.	.	.	.	.	V	Y	A	I	N	P	D	G	T	E	K	W	N	F	Y	A	G	Y	W	T	V	T	R	P	A	I	S	E	D	G	T	I	Y	V	T	S	L	D	G	H
Template Known Secondary structure		T	T	S									S	S				S						T	T							S	S	S	.	.	.	.	.	.	.						T	T	S									S	S				S						T	T	S							T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.								.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	.	.	.	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T
Query Conservation																									.	.	.
Alig confidence																									.	.	.																				.												.	.	.
Template Conservation																																															.												.	.	.
Template Sequence		L	Y	A	I	N	P	D	G	T	E	K	W	R	F	K	T	G	K	R	I	E	S	S	P	V	I	G	N	T	D	T	I	Y	F	G	S	Y	D	G	H	L	Y	A	I	N	.	P	D	G	T	E	K	W	N	F	E	T	.	.	.	G	S	W	I	I	A	T	P	V	I	D	E	N	G	T	I	Y	F	G	T
Template Known Secondary structure							T	T	S									S	S				S						T	T	S							T	T								.	T	T	S									.	.	.	S	S				S						T	T
Template Predicted Secondary structure																																															.												.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		358	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	S	S	G	E	L	L	K	V
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	R	N	G	K	F	Y	A	L
Template Known Secondary structure		.	.	T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				313	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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