Phyre 2 alignment of P75804 with c3frxB

Job Description P75804
Confidence 99.45% Date Thu Jan 5 12:14:23 GMT 2012

Rank 51 Aligned Residues 291

% Identity 14% Template c3frxB_

PDB info PDB header:signaling protein Chain: B: PDB Molecule:guanine nucleotide-binding protein subunit beta- PDBTitle: crystal structure of the yeast orthologue of rack1, asc1.

Resolution 2.13 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence	V	E	V	L	Q	D	K	L	D	H	P	W	A	L	A	F	L	P	.	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S
Query Conservation																			.
Alig confidence																			.																										.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence	R	G	T	L	E	G	H	N	G	W	V	T	S	L	A	T	S	A	G	Q	P	N	L	L	L	S	A	S	R	D	K	T	L	I	S	W	K	L	T	G	D	D	Q	K	.	.	.	.	.	F	G	V	P	V	R	S	F	K	G	H	S	H	I	V	Q	D	C	T	L	T	A	D	G	A	Y	A	L	S	A	S
Template Known Secondary structure								S	S									S	S		T	T							T	T	S											T	T		.	.	.	.	.												S	S									T	T	S	S
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

	106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	W	D	K	T	L	R	L	W	D	V	A	T	G	E	T	Y	Q	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	H	K	S	D	V	X	S	V	D	I	D	K	K	A	S	X	I	I	S	G	S	R	D	K	T	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	T	T	S							T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S									T	T	S								T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

	186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	V	W	T	I	K	G	Q	C	L	A	T	L	L	G	H	N	D	W	V	S	Q	V	R	V	V	P	N	S	V	T	I	I	S	A	.	.	G	N	D	K	X	V	K	A	W	N	L	N	Q	F	Q	I	E	A	D	F	I	G	H	N	S	N	I	N	T	L	T	A
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S										S	S																		.	.		T	T	S							T	T	T	T											S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template SS confidence
													133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

	266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.						.	.	.
Predicted Secondary structure																																						.	.	.																																	.	.	.	.	.
Query SS confidence																																						.	.	.																																	.	.	.	.	.
Query Sequence	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	.	.	.	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	.	.	.	.	.	L	T	D
Query Conservation																																						.	.	.																																	.	.	.	.	.
Alig confidence																																						.	.	.																																	.	.	.	.	.
Template Conservation
Template Sequence	S	P	D	G	T	L	I	A	S	A	G	K	D	G	E	I	X	L	W	N	L	A	A	K	K	A	X	Y	T	L	S	A	Q	D	E	V	F	S	L	A	F	S	P	N	R	Y	W	L	A	A	A	T	A	T	G	I	K	V	F	S	L	D	P	Q	Y	L	V	D	D	L	R	P	E	F	A	G	Y	S	K	A
Template Known Secondary structure		T	T	S	S							T	T								T	T	T	T										S									S	S	S	S							T	T								T	T												T	T			T	T
Template Predicted Secondary structure
Template SS confidence
	205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

	338	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	.	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V	S
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence	A	E	P	H	A	V	S	L	A	W	S	A	D	G	Q	T	L	F	A	G	Y	T	D	N	V	I	R	V	W	Q	V	X
Template Known Secondary structure	T											T	T	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
	285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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