Phyre 2 alignment of P75804 with c3dwlH

Job Description P75804
Confidence 98.88% Date Thu Jan 5 12:14:23 GMT 2012

Rank 124 Aligned Residues 261

% Identity 11% Template c3dwlH_

PDB info PDB header:structural protein Chain: H: PDB Molecule:actin-related protein 2/3 complex subunit 1; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit

Resolution 3.78 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	28	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence	E	V	L	Q	D	K	L	D	H	P	W	.	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E
Query Conservation												.
Alig confidence												.																																			.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.
Template Sequence	S	Q	V	L	H	I	L	P	K	P	S	Y	E	H	A	F	N	S	Q	R	T	E	F	V	T	T	T	A	T	N	Q	V	E	L	Y	E	Q	D	G	N	G	W	K	H	A	R	.	.	.	.	.	.	.	.	T	F	S	D	H	D	K	I	V	T	C	V	D	W	A	P	K	S	N	R	I	V	T	C	S	Q
Template Known Secondary structure								S	S			S						S	S	S	S							S	S	S		B							T	T							.	.	.	.	.	.	.	.		B				S	S									T	T	T								T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Template SS confidence
	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

	107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence	D	R	N	A	Y	V	Y	T	W	K	Q	T	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	R	L	N	R	A	A	T	F	V	R	W	S	P	N	E	D	K	F	A	V	G	.	S	G	A	R	V	I	S	V	C	Y	F	E	W	W	V	S	K	H	L	K	R
Template Known Secondary structure	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S									T	T	S	S						.		S	S	S							B			B							S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
	76	.	.	.	80	.	.	.	.	.	.	.	.	.																						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

	187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	P	L	R	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	S	L	D	W	H	P	N	N	V	L	L	A	A	G	.	.	C	A	D	R	K	A	Y	V	L	S	A	Y	V	R	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	P
Template Known Secondary structure	S			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	S						.	.		S	S	S										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	144	.	.	.	.																									.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180															.	.	.

	267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	.	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V
Query Conservation																																																										.
Alig confidence																																.	.	.	.	.	.	.																				.
Template Conservation																																.	.	.	.	.	.	.
Template Sequence	E	A	S	V	W	G	S	R	L	P	F	N	T	V	C	A	E	Y	P	S	G	G	W	V	H	A	V	G	F	S	P	.	.	.	.	.	.	.	S	G	N	A	L	A	Y	A	G	H	D	S	S	V	T	I	A	Y	P	S	A	P	E	Q	P	P	R	A	L	I	T	V	K	L	S	Q	L	P	L	R	S	L
Template Known Secondary structure		S		S	S		S														S	S	S								T	.	.	.	.	.	.	.	T	S	S							T	T	T									S	T	T	S											S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.
Template SS confidence
	185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

	346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	L	W	A	N	E	S	A	I	V	A	A	G	Y	N	Y	S	P	I	L	L
Template Known Secondary structure					T	T							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
	258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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