Job Description P75804 Confidence 99.78% Date Thu Jan 5 12:14:23 GMT 2012 Rank 16 Aligned Residues 308 % Identity 13% Template c3dm0A_ PDB info PDB header:sugar binding protein,signaling protein Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with PDBTitle: maltose binding protein fusion with rack1 from a. thaliana Resolution 2.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																		.																		.
Query SS confidence																		.																		.
Query Sequence		C	L	S	S	A	L	W	A	A	P	A	T	V	N	V	E	.	V	L	Q	D	K	L	D	H	P	W	A	L	A	F	L	P	D	.	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L
Query Conservation																		.																		.
Alig confidence																		.																		.																									.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		A	L	A	A	A	Q	T	N	A	A	A	G	L	V	L	K	G	T	M	R	A	H	T	D	M	V	T	A	I	A	T	P	I	D	N	A	D	I	I	V	S	A	S	R	D	K	S	I	I	L	W	K	L	T	K	D	D	K	A	.	.	.	.	.	Y	G	V	A	Q	R	R	L	T	G	H	S	H	F	V	E
Template Known Secondary structure													S	S										S	S									T	T			S							T	T	S										S	T	T		.	.	.	.	.	S											S	S
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.						.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	V	L	S	S	D	G	Q	F	A	L	S	G	S	W	D	G	E	L	R	L	W	D	L	A	A	G	V	S	T	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	G	H	T	K	D	V	L	S	V	A	F	S	L	D	N	R	Q	I	V	S	A	S	R	D	R	T	I
Template Known Secondary structure							T	T	S	S							T	T	S							T	T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S									T	T	S	S							T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1068	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100																			.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	W	N	T	L	G	E	C	K	Y	T	I	S	E	G	G	E	G	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	V	S	C	V	R	F	S	P	N	T	L	Q	P	T	I	V	S	A	S	W	D	K	T	V	K	V	W	N	L	S	N	C	K	L	R
Template Known Secondary structure						T	T	S								S	S	T	T	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S		S	S	S								T	T	S							T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150																							.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	.	.	.	.	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D
Query Conservation																																																					.	.	.	.
Alig confidence																																																					.	.	.	.													.
Template Conservation																																																																					.
Template Sequence		S	T	L	A	G	H	T	G	Y	V	S	T	V	A	V	S	P	D	G	S	L	C	A	S	G	G	K	D	G	V	V	L	L	W	D	L	A	E	G	K	K	L	Y	S	L	E	A	N	S	V	I	H	A	L	C	F	S	P	N	R	Y	W	L	C	A	A	T	.	E	H	G	I	K	I	W	D	L	E	S	K
Template Known Secondary structure								S	S									T	T	S	S							T	T	S	B						T	T	T	T							B		S	S									S	S	S	S							.	T	T							T	T	T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		1188	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.		.	.	.	.	.	1260	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G	.	.	E	L	L	K	V
Query Conservation																																						.	.
Alig confidence																												.										.	.
Template Conservation																												.
Template Sequence		S	I	V	E	D	L	K	V	D	L	K	K	V	I	Y	C	T	S	L	N	W	S	A	D	G	S	.	T	L	F	S	G	Y	T	D	G	V	I	R	V	W	G	I
Template Known Secondary structure																								T	T	S	S	.							T	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		1267	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.		.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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