Job Description P75804 Confidence 99.21% Date Thu Jan 5 12:14:23 GMT 2012 Rank 89 Aligned Residues 276 % Identity 11% Template c3cfvA_ PDB info PDB header:histone/chaperone Chain: A: PDB Molecule:histone-binding protein rbbp7; PDBTitle: structural basis of the interaction of rbap46/rbap48 with2 histone h4 Resolution 2.60 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.
Predicted Secondary structure																									.																																																					.
Query SS confidence																									.																																																					.
Query Sequence		V	N	V	E	V	L	Q	D	K	L	D	H	P	W	A	L	A	F	L	P	D	N	H	.	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	.	I	W	L
Query Conservation																									.																																																					.
Alig confidence																									.																																																					.
Template Conservation
Template Sequence		I	E	C	E	I	K	I	N	H	E	G	E	V	N	R	A	R	Y	X	P	Q	N	P	H	I	I	A	T	K	T	P	S	S	D	V	L	V	F	D	Y	T	K	H	P	A	K	P	D	P	S	G	E	C	N	P	D	L	R	L	R	G	H	Q	K	E	G	Y	G	L	S	W	N	S	N	L	S	G	H	L	L
Template Known Secondary structure											S	S			S						T	T										S	S	S	S						G	G	G	S		S	S			T	T						S							S	S									S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Sequence		S	A	S	D	D	H	T	V	C	L	W	D	I	N	A	G	P	K	.	.	.	.	.	.	.	.	.	.	.	E	G	K	I	V	D	A	K	A	I	F	T	G	H	S	A	V	V	E	D	V	A	W	H	L	L	H	E	S	L	F	G	S	V	A	D	D	Q	K	L	X	I	W	D	T	R	S	N	T	T	.
Template Known Secondary structure					T	T	S							S	S		S		S	.	.	.	.	.	.	.	.	.	.	.	S		S					S							S	S									S	S		T	T							T	T	S							S	S	S	S		S	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																																																			.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.												.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	P	S	H	L	V	D	A	H	T	A	E	V	N	C	L	S	F	N	P	Y	S	E	F	I	L	A	T	G	S	A	D	K	T	V	A	L	W	D	L	R	N	L	K	L	K	L	H	T	F	E	S	H	K	D	E	I	F	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S							S	S									S	S		S	S							T	T	S							T	T		T	T	S									S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.												.	.	.	.	330	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	.	.	.	.	.	.	.	.	.	.	.	D	K	V	T	E	D
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	W	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	E	T	I	L	A	S	S	G	T	D	R	R	L	N	V	W	D	L	S	K	I	G	E	E	Q	S	A	E	D	A	E	D	G	P	P	E	L
Template Known Secondary structure						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T							T	T	S							G	G	G	T	T									T	T			T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.																																					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.							.
Query SS confidence																				.							.
Query Sequence		G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	.	D	G	Y	L	Y	V	.	L	T	D	E	S	S	G	E	L	L	K	V	S
Query Conservation																				.							.
Alig confidence																				.							.
Template Conservation
Template Sequence		L	F	I	H	G	G	H	T	A	K	I	S	D	F	S	W	N	P	N	E	P	W	V	I	C	S	V	S	E	D	N	I	X	Q	I	W	Q	X	A
Template Known Secondary structure									S	S									S	S	S	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions