Job Description P75804 Confidence 99.24% Date Thu Jan 5 12:14:23 GMT 2012 Rank 85 Aligned Residues 305 % Identity 11% Template c3c75J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin Resolution 2.50 Å

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		41	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		A	F	L	P	D	N	H	G	M	L	I	.	.	.	.	.	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	A	P	D	A	R	R	V	Y	I	Q	D	P	A	H	F	A	A	I	T	Q	Q	F	V	I	D	G	S	T	G	R	I	L	G	M	T	.	.	.	.	.	.	.	.	.	.	.	.	D	G	G	F	L	P	H	P	V	A	A	E	D	G	S	F	F	A	Q	A	S	T	V	F	E	R	I	A	R	G	K
Template Known Secondary structure							T	T								T	T	T		S	S								T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.				S	S							T	T	S	S												T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.													.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D
Query Conservation
Alig confidence														.																																					.																									.	.	.	.
Template Conservation														.																																					.																									.	.	.	.
Template Sequence		R	T	D	Y	V	E	V	F	D	P	V	T	.	F	L	P	I	A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	Q	W	M	N	A	L	T	P	D	N	K	N	L	L	F	Y	.	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	K	T	F	D	R	M	L	D	V	.	.	.	.	P	D
Template Known Secondary structure											T	T	T	.										T	T							S			G	G	G	S				T	T	S	S						.			S	S	S								T	T	T	T									.	.	.	.		S
Template Predicted Secondary structure														.																																					.																									.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.														.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	Y	H	I	F	P	A	S	P	T	V	F	Y	M	N	C	R	D	G	S	L	A	R	V	D	F	A	D	G	E	T	K	V	T	N	T	E	V	F	H	T	E	D	E	L	L	I	N	H	P	A	F	S	L	R	S	G	R	L	V	W	P	T	Y	T	G	K	I	F	Q	A	D	L	T	A	E	G	A	T	F
Template Known Secondary structure										T	T							T	T	S	S								T	T											S		T	T	S		B		S						T	T	T							B	T	T	S									S	S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I
Query Conservation
Alig confidence																																								.	.	.	.																														.	.	.	.
Template Conservation																																								.	.	.	.																														.	.	.	.
Template Sequence		R	A	P	I	E	A	L	T	E	A	E	R	A	D	D	W	R	P	G	G	W	Q	Q	T	A	Y	H	R	Q	S	D	R	I	Y	L	L	V	D	.	.	.	.	Q	R	D	E	W	K	H	K	A	A	S	R	F	V	V	V	L	N	A	E	T	G	E	R	I	N	K	I	E	.	.	.	.	L	G	H	E	I
Template Known Secondary structure							S	S		T	T	T	G	G	G	T					S	S	S						T	T	T	T								.	.	.	.				T	T		T	T	S										T	T	T									.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																														.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.					.	.	370	.	.
		343	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		R	D	V	R	T	G	P	D	G	Y	.	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V	S	P	R	N
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		D	S	I	N	V	S	Q	D	A	E	P	L	L	Y	A	L	S	A	G	T	Q	T	L	H	I	Y	D	A	A	T
Template Known Secondary structure									S	S	S								T	T	T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions