Job Description P75804 Confidence 100.00% Date Thu Jan 5 12:14:23 GMT 2012 Rank 3 Aligned Residues 323 % Identity 32% Template c3a9gA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of pqq-dependent sugar dehydrogenase apo-form Resolution 2.39 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	V	E	V	L	Q	D	K	L	D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y
Query Conservation
Alig confidence																															.																		.	.	.
Template Conservation																															.																		.	.	.
Template Sequence		F	K	I	S	E	V	A	S	D	L	E	V	P	W	S	I	A	P	L	G	G	G	R	Y	L	V	T	E	R	.	P	G	R	L	V	L	I	S	P	S	G	K	K	L	V	A	S	.	.	.	F	D	V	A	N	V	G	E	A	G	L	L	G	L	A	L	H	P	E	F	P	K	K	S	W	V	Y	L	Y	A
Template Known Secondary structure										S		S										T	T							T	.	T	T							S	S								.	.	.						S	T	T		S								T	T	T	T	T	S
Template Predicted Secondary structure																															.																		.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		S	Y	F	A	E	G	G	H	I	R	N	R	V	I	R	G	R	L	D	G	S	T	F	K	L	K	E	V	K	T	L	I	D	G	I	P	.	.	G	A	Y	I	H	N	G	G	R	I	R	F	G	P	D	G	M	L	Y	I	T	T	G	D	A	A	D	P	R	L	A	Q	D	L	S	S	L	A	G	K	I	L
Template Known Secondary structure						G	G	G													S	S	S															.	.			S	S										T	T	S									T	T		G	G	G	G	T		T	T			S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F
Query Conservation
Alig confidence															.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		R	V	D	E	E	G	R	P	P	A	D	N	P	.	.	.	.	.	F	P	N	S	P	I	W	S	Y	G	H	R	N	P	Q	G	I	D	W	H	R	A	S	G	V	M	V	A	T	E	H	G	P	V	G	H	D	E	V	N	I	I	L	K	G	G	N	Y	G	W	P	L	A	T	G	K	A	G	R	G	E	F
Template Known Secondary structure					T	T	S				T	T	S	S	.	.	.	.	.	S	T	T									S									T	T	T										S	S	S									T	T		B			T	T	T			S					T	T	S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	.	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R
Query Conservation																																																																	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																																																	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	P	.	.	.	.	.	.	.	.	.	.	.	.	V	I	D	T	G	S	E	T	W	A	P	S	G	A	S	F	V	H	G	D	M	F	P	G	L	R	G	W	L	L	I	A	C	L	R	G	S	M	L	A	A	V	N	F	G	D	N	M	E	V	R	K	I	S	T	F	F	K	N	V	F	G	R	L	R
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	S				T	T													S	S	S		G	G	G	T	T							T	T	T	T									G	G	G										T	T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.													.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.										360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	.	.	.	.	.	.	.	.	.	S	S	G	E	L	L	K	V	S	P	R
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	I	D	D	D	G	G	I	L	I	S	T	S	N	R	D	G	R	G	S	L	R	A	G	D	D	K	I	L	K	I	V	S	E
Template Known Secondary structure							T	T	S								T	T	S	S	S	S				T	T		S								T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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